Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_18020 |
Symbol | dctD |
ID | 7760737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1792609 |
End bp | 1793949 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643804701 |
Product | sigma54-dependent response regulator of C4 dicarboxylate transport, two component; DctD |
Protein accession | YP_002798990 |
Protein GI | 226943917 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.266513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAGA TTCTCTTCAT CGACGACGAA GCACCGATCC GCGAAGCGGT GCAGCAGTGG CTGGAGCTGT CCGGGCTCGC GGTGCGTACC TGCGCCCACG CCGAGGAGGC GCTGGCGCTG CTCGACGCCG ACTTCCCCGG GGTGGTGGTC AGCGATGTGC GCATGCCCGG CATGGACGGC CTGGCGCTGC TCGAACGCCT CAAGGCGCTG GATGCCGAAT TGCCGGTGAT CATGGTCACC GGGCATGGCG ACGTGCCCAT GGCGGTGACC GCGATGCAGC AGGGCGCCTA CGACTTCATC GAGAAGCCCT TCAGCCCCGA GCGCCTGCTC GGCAGCCTGC GGCGCGCCCT GGAGATGCGC CGGCTGGTCT GCGAGAACCG CGCGCTGCGC CGCCAGGTGG CGCGGCGCGA GCACATCGAG GGCCGTCTGC TCGGCGTGTC GCCGGCGATG GAGGAACTGC GCCGGCAGAT CCTCGAACTG GCGCCGACCA CGGTCAACGT GCTGGTCCGC GGCGAGACCG GCAGCGGCAA GGAATGCGTG GCGCGCTGCC TGCACGCCTT CGGCCCGCGC GCCGGCAAGG CTTTCGTCGC GCTCAACTGC GCGGCGATTC CCGAGCAGTT GTTCGAGAGC GAGCTGTTCG GCCACGAGAG CGGCGCCTTC ACCGGCGCCC AGGGCAAGCG CATCGGCCGT ATCGAGCACG CCGACGGCGG CACCCTGTTC CTCGACGAGA TCGAGAGCCT GCCGCTGGCG CAGCAGGCCA AGCTGTTGCG CGTGCTGCAG GAGAAGACGC TGGAGCGGCT CGGCTCCAAC CGCAGCATCG CCGTCGACCT GCGGGTGATC GGCGCGGTCA AGCCGGACCT GGTCGCCGAA GTGCGCGCCG GGCGTTTTCG CGAGGATCTC CTGTACCGGC TCAATGTCGC CGAGTTGCGC GTCCCGCCGC TGCGCGAGCG GCGCGAGGAC ATTCCGCTGC TGTTCGAGTA TTTCGCCCTC GCCGCGGCCG AGCGTCACGA CCGCGAACCG CGCCCGCTGG CGGCCGCCGA ACTGGCGCGG CTCATGGCTC ACGACTGGCC GGGCAACGTG CGCGAGCTGG TCAACGCCGC CGAGCGTCAC GTACTCGGCC TGGGCGGGCG GACCGGCGAG GCGCTGGCGG CGCCGCGGTC GCTGGCGGCG CAGCTGGAGG CCTTCGAGGC GCAGTGCCTG CGCCAGGCCC TGCAGCAGTG CCGCGGCAAC ATCGCCGAGG TCATGGCCCT GCTGCAACTG CCCCGGCGGA CGCTCAACGA GAAGATGCAA CGCCACGGCC TGAACCGCAT CGATTTCCTG CCCGCCGGGG ACCAGGACTG A
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Protein sequence | MQQILFIDDE APIREAVQQW LELSGLAVRT CAHAEEALAL LDADFPGVVV SDVRMPGMDG LALLERLKAL DAELPVIMVT GHGDVPMAVT AMQQGAYDFI EKPFSPERLL GSLRRALEMR RLVCENRALR RQVARREHIE GRLLGVSPAM EELRRQILEL APTTVNVLVR GETGSGKECV ARCLHAFGPR AGKAFVALNC AAIPEQLFES ELFGHESGAF TGAQGKRIGR IEHADGGTLF LDEIESLPLA QQAKLLRVLQ EKTLERLGSN RSIAVDLRVI GAVKPDLVAE VRAGRFREDL LYRLNVAELR VPPLRERRED IPLLFEYFAL AAAERHDREP RPLAAAELAR LMAHDWPGNV RELVNAAERH VLGLGGRTGE ALAAPRSLAA QLEAFEAQCL RQALQQCRGN IAEVMALLQL PRRTLNEKMQ RHGLNRIDFL PAGDQD
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