| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17800 |
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| Symbol | colR |
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| ID | 7760715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1766020 |
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| End bp | 1766703 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643804679 |
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| Product | response regulator, transcriptional regulatory protein (two-component), ColR |
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| Protein accession | YP_002798968 |
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| Protein GI | 226943895 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0435874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATCC TGGTCATCGA AGACAACCGC GACATCCTCG CCAACGTGCT CGACTATCTG
GAGCTCAAGG GCTACACGGT CGATTGCGCC CAGGACGGAC TGAGCGGACT GCACCTGGCG
GCTACCGGGC AGTACGACCT GATCGTGCTG GACATCATGC TGCCGGGCAT CGACGGCTAC
CAGGTCTGCG AGCGCCTGCG CCGCGATGCC GGCAGCGAGA CGCCGATCAT CATGCTGACC
GCCCGCGACG CCCTGGACGA CCGCTTGCAG GGCCTGAACA GCGGCGCCGA CGACTACCTG
CTCAAGCCCT TCGCCCTATC GGAACTGGTG GCGCGCATCG AGGCGGTGCT GCGCCGCACC
CAGGGCAGCC GCAAGCGCCA GTTGCAGGTC GGCGACTTGA TCTACGACCT CGACACCCTG
AACGTCAGCC GCGCCGGCAA GCAACTGCGG CTGAATCCGA TCGGCTACAA GCTGCTGGCG
ATCCTGATGC AGAAGAGCCC GGCCGTGGTG CGCCGGGAAT TCCTGGAGAA CGCTCTGTGG
GGCGACGACC TGCCGGAGAG CGACAGTCTG CGCAGTCATA TCCACCAATT GCGCCAGGCG
CTCGACAAGC CTTTCGACAA GCCCCTGCTG CACACCATCC ACGGTGTCGG CTACCGCCTG
GCGGAGAACC CGGACGCGAA TTAG
|
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| Protein sequence | MRILVIEDNR DILANVLDYL ELKGYTVDCA QDGLSGLHLA ATGQYDLIVL DIMLPGIDGY
QVCERLRRDA GSETPIIMLT ARDALDDRLQ GLNSGADDYL LKPFALSELV ARIEAVLRRT
QGSRKRQLQV GDLIYDLDTL NVSRAGKQLR LNPIGYKLLA ILMQKSPAVV RREFLENALW
GDDLPESDSL RSHIHQLRQA LDKPFDKPLL HTIHGVGYRL AENPDAN
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