Gene Avin_17660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17660 
Symbol 
ID7760701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1751455 
End bp1752732 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content66% 
IMG OID643804665 
Productfucose permease 
Protein accessionYP_002798954 
Protein GI226943881 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.634966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATC AGCAACAGCG CTCGCCAGCC GAGTCCGGCA AGAGCGCGCC GGTTTCCACG 
ACCTTCGCCT TCGTCCTGGT GACGGCGCTG TTTTTCATGT GGGGGCTGTC CCATGGCCTG
CTGGATGTCC TGAACCATCA CTTCCAGCAA ACCCTGAACA TTTCCCGGGC CAGATCGGGC
CTGATCCAGA CCGCCTATTT CGGCGCCTAC TTCATCATGG CGCTGCCGGT CGGCCTGTTC
ATGGAGCGCT GTGGCTACAA GGCCGGCATC CTGCTCGGCC TGGCCCTGTT CGCGGTCGGC
GCGCTGCTGT TCGTGCCGGC TTCCTGGGCC GAGACCTTCG ATGCCTTCCT GATCGCGCTG
TTCGTCCTCG CCTGCGGACT GGCCTGCCTG GAGGTGTCCG CCAATCTCTA CGCCGCCGCC
CTGGGCGACC CGGACAAGAC CGTGCAGCGC CTGAACTTCG CCCAGTCCTT CAACGGCCTG
GGCGTGTTCC TCGGGCCGAT GCTCGGCGGC GTGGTGCTCT ATGCGCCGCC GCTCGAACTG
GCCGGCAGCA GCATCGCGCC GACTTCGCTG ATCTACGTGA CGCTGGCCGT GCTGGTGGTG
GGACTGATGG CGGTCTTCGC CCGCACCGCC ATCCCCGAGG TCGGCAGCGA GCGCGCGGCT
GGCGGTGAGG CCGCGGAGGA AGCCGAGGAG GGTGTCTCGC TGTGGCGCCG CCGGAACTTC
ACCTTCGCCC TGCTGGCGCA GTTCTGCAAC ATCGGCGCCT ATGTCGGCGT CGGCGCCTAC
TTCATCAATT TCGCCCTGGA TCACTGGCAG GGCGGCACGC CGCAGTTCTG TTCCTTCCTG
CTGTCGCTGG CGATGATCGG CTACATGGTC GGCCGCTTCT CCGGCACCTG GCTGATGCGC
CGCATCCCGG CGCGCAGCCT GCTGGTGTTC AACGCCATCG CCTGCGCCTT CCTGAGCGTC
GTCGCCATGC TGGCGCTGGA GAAGGTTTCG GTGGTCGCGG TGATCGGCAT GTATTTCTTC
ATGTCGATCA TGTACCCGAC CATCTTCGGC ATGGGCGTGC AGGGTCTGGG CCGGCAGACC
AACCGGGGCG GCTCCATCCT GGTGATGACC CTGGTCGGCG CCGCGCTCCT GCCGCTGGTC
ATGGGCGGGA TCGCCGACGA CTTCGGCATG GCGACCGCTT TCATCGTTCC GTTCTTCTGC
TACGTGGTGG TGGCGCTGTA CGGACTGTCC CAGAAGCCGG CCGAGTCCAC CGTGTCCCTG
GCCGCCCAGG CCGAGTGA
 
Protein sequence
MNNQQQRSPA ESGKSAPVST TFAFVLVTAL FFMWGLSHGL LDVLNHHFQQ TLNISRARSG 
LIQTAYFGAY FIMALPVGLF MERCGYKAGI LLGLALFAVG ALLFVPASWA ETFDAFLIAL
FVLACGLACL EVSANLYAAA LGDPDKTVQR LNFAQSFNGL GVFLGPMLGG VVLYAPPLEL
AGSSIAPTSL IYVTLAVLVV GLMAVFARTA IPEVGSERAA GGEAAEEAEE GVSLWRRRNF
TFALLAQFCN IGAYVGVGAY FINFALDHWQ GGTPQFCSFL LSLAMIGYMV GRFSGTWLMR
RIPARSLLVF NAIACAFLSV VAMLALEKVS VVAVIGMYFF MSIMYPTIFG MGVQGLGRQT
NRGGSILVMT LVGAALLPLV MGGIADDFGM ATAFIVPFFC YVVVALYGLS QKPAESTVSL
AAQAE