Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_17610 |
Symbol | |
ID | 7760696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1744870 |
End bp | 1746270 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643804660 |
Product | sigma54-dependent activator protein |
Protein accession | YP_002798949 |
Protein GI | 226943876 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCCA TCGACCGCCT CAAGGACTAT CACAGCACCC GCCTGCAGGC GATGCGCTCG CTGTTCGAGA TCGTCGAGCA GTCGAGCGAG GGCACGGTGA TCGTCGACCG CGACGCGCGC ATCGTCTGGA TCAACGAACG CTACGCCCGG CGCTTCGGCC TCGCCGATCC GGCCGAGGCC CTCGGCCAGC CGGTGGAGCG TGTGATCCCC GGCAGCCTGC TGCGCGAGGT GGCGCACAGC GGCCAGCCGA TCCTGCTGGA CATGCTGGAC ACCCCGAAGG ACCCGCTGGT GGTGATGCGC CTGCCGGTCC GCGACGAGGA CGGACGCTCG ATCGGCGCCA TCGGCTTCGC CCTGTTCGAC GAACTCAAGC GCCTCTCGCC GCTGGTCCGC CACTACCTGA GCCTGCAGGA GGAACTGGCC TCGGCCCGCT CCCTACTGCA GGCGCGCCAG GCCCGCTACA GCTTCGCCCA GTACATCGGC ACCAGCGCCG CGGTCCTGGA GGTCAAGCGC CGCGCCCGTC GCGGCGCGGC CAGCGAGGCG CCGGTGCTGC TGCTCGGCGA GACCGGCACC GGCAAGGAAC TGCTGGCCCA CGCCATCCAC GCCGCCTCGC CGCGCGCCCA CCGGCCCTTC GTCAGCCTGA ACATGGCGGC CATCCCGGAA AACCTGCTGG AGGCGGAGTT CTTCGGCACC GCGCCGGGCG CCTTCACCGG CGCCAGCCGC AAGGCGCGGC CCGGCAAGTT CCAGATCGCC CAGGGCGGCA CCCTGTTCCT CGACGAGATC GGCGACATGC CCCTGCACCT GCAGGGCAAG CTGCTGCGCG TGCTGCAGGA GAAGGAATTC GAGCCGGTCG GCTCCAACGA GATCCTGTTC AGCGACGTGC GCCTGATCAC CGCCACCTCC TGCGACCTGG AAGAGGCGGT GCGCCAGGGC AAATTCCGCG CCGACCTCTA CTACCGGCTG AACGTGCTGC CGATCCACCT GCCGCCGTTG CGCGAGCGCC CCGAAGACCT GCCGGCGCTG TGCGAGGCCA TCCTCGGCCA GCTCGGCAGC GACCATACGC TCAGTCCCGC CGCCCTCGCC CTGCTCGCCC GCCACGACTG GCCGGGCAAC ATCCGCGAAC TGCGCAACCT GCTGGAGCGC GCCATCCTGC TCGGCGACGA CCCATACCTG GACGAGGCCA TGCTCGCCGC CGCCCTGGGA CCGCTGCCGC CCCCCGCGCC GGCCGCGGTA GCGGCCGTCA CCGGCGAGAA CTACCGGCAG GCCATGCAGC GCTTCGAGCG CGAACTGCTG GAAAACGCCC TGGCGAGCGC CGGCAATGCC CTGGAGGCCG CGCGACGCCT GGGCCTGAGC CGCTCCACCC TGTACCGCCG GCTGGCCGCC CTGGGTATCT CGTCCCGTTA A
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Protein sequence | MNSIDRLKDY HSTRLQAMRS LFEIVEQSSE GTVIVDRDAR IVWINERYAR RFGLADPAEA LGQPVERVIP GSLLREVAHS GQPILLDMLD TPKDPLVVMR LPVRDEDGRS IGAIGFALFD ELKRLSPLVR HYLSLQEELA SARSLLQARQ ARYSFAQYIG TSAAVLEVKR RARRGAASEA PVLLLGETGT GKELLAHAIH AASPRAHRPF VSLNMAAIPE NLLEAEFFGT APGAFTGASR KARPGKFQIA QGGTLFLDEI GDMPLHLQGK LLRVLQEKEF EPVGSNEILF SDVRLITATS CDLEEAVRQG KFRADLYYRL NVLPIHLPPL RERPEDLPAL CEAILGQLGS DHTLSPAALA LLARHDWPGN IRELRNLLER AILLGDDPYL DEAMLAAALG PLPPPAPAAV AAVTGENYRQ AMQRFERELL ENALASAGNA LEAARRLGLS RSTLYRRLAA LGISSR
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