Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_17380 |
Symbol | |
ID | 7760673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1723900 |
End bp | 1725684 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643804637 |
Product | Acyl-CoA dehydrogenase |
Protein accession | YP_002798926 |
Protein GI | 226943853 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00730937 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTT ACGAGGCGCC CCTGGAAGAC CTGAATTTCA TTTTCGAGCA TCTGCTGGAC AACGAACGGC TCGTCGCCTT GCCCGGCTTC GAGGATCTGT CGACGGAACT GATCGGCGCC ATCCTGGAGG AGGCCGGCAG GTTCGCCTCC GGCGTACTGG CGCCGCTGAA CGCGACAGGC GACCGGGAAG GCGTGCGCTG GAGCGACGGC GAGGTCGCCA CGCCCGAGGG ATTCAAGGAA GCCTATCGGC AGTATGTCGA ATCCGGCTGG AACAACGTCG CCGTGGAGAA GGAATACGGC GGCCAGGGGC TTCCCTACGC CGTCTCGATG GCCATCGGCG AAATCATGAT GGCGGCCAAC AAGTCCCTGG TCATGTGCCC CGGCCTCACG CTCGGCGCGA TAGAGTCGCT CTGCGCCGCG GCCTCGCCCG AGCAGAAGGC GCTGTACCTG CCCAACCTGG TCAGCGGCCG CTGGAGCGGC ACCATGAACC TGACGGAGCC CGACGCGGGC TCCGACGTCG GCGCGCTGCG CTGCAAGGCC ATCGAACAGG CCGACGGCAG CTACCGGCTG CACGGGCAGA AAATCTTCAT CAGCTACGGC GAGCACGACC TGACGGAAAA CATCGTCCAC CTCGTGCTGG CCCGCACGCC GGACGCGCCG GAAGGTGTGA AGGGCATCTC GCTGTTCCTG GTACCCAAGT TCCTGGTCAA TCCGGACGGC AGCCTGGGCG CGCGCAACGA CGTGCGCTGC GTGTCCACCG AGCACAAGCT GGGTATCCAT GGCAGCCCGA CCTGCGTTCT CGCCTACGGC GACCGCGAGG GCGCCACGGG CTACCTGGTG GGCGAGAAGA ACAGGGGCCT GCAGGCCATG TTCGTGATGA TGAACATGGC GCGGCTGATC GTCGGCCTGG AGGGCGTGGC CCTCTCCGAG CGCGCCTATC AGCAGGCGCT GGACTATGCC CGCGAGCGCA TCCAGGGTGT GGATGCGCTC AGCGGCGAGC CGGTAGCCAT CGTCCGGCAC CCGGACGTGC GCCGCATGCT GCTGAGCATG AAGTCGCAGA TCGAGGCCAT GCGGGCGCTT TCCCTGGTCA TCGCCCAGGC GCAGGATCTG GCGCAGCGCC ATGCCGACCC CGAAGTTCGC CGCCGCAACC AGGCGTTCGT CGAACTGCTG ACCCCGGTAT TCAAGGCCTG GGCGACGGAA AACGGTATCC GGCTCACCCA ACTGGGCGTG CAGATCCACG GCGGCATGGG TTTCGTCGAG GAGACCGGCG CCGCCCAGCA TCTGCGCGAC GCCGTCATCG GCGTGATCTA CGAGGGCACC ACGGGCATCC AGGCGGCCGA TCTGGTCGGG CGCAAGCTGG CGCGGGATGG CGGCGCGGCC TTCGCCGCGC TGCTGCGGGA CATGTCCGAC GTGGCGGAGG AACTGCAGCG CCATCGGGAC CTGGGCGACA TCGGCAGCGG CCTCGCCGGG GGCATCGCCA GCCTCCGGCA GGCGGGCGAG CACATCCTGC CGCTGTACCG CGACGACGCC CAGGCGGCCC TGGCGGTTTC GGTGCCCTTC CTGATGCTCG CGGGGACGGT CGCCGGTGCC TGGCAGCATG GCCGCGGCGC GCTCGCCGCG GCCCGGCTGA TCGAGGCGCG CGGCGAACCC GGCGCGTTCC TGAAAGGCAA GCTGGTGAGC GCGCGCTTCT ACGTCGCCCA TGTCCTCGTC CAGGCGCTGG CGCTGGCGGA GACGGTCCGC TGCGGTGCGG CGCCGGTGGC CGAATCGGCC GATTTCCTGT GCTGA
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Protein sequence | MSRYEAPLED LNFIFEHLLD NERLVALPGF EDLSTELIGA ILEEAGRFAS GVLAPLNATG DREGVRWSDG EVATPEGFKE AYRQYVESGW NNVAVEKEYG GQGLPYAVSM AIGEIMMAAN KSLVMCPGLT LGAIESLCAA ASPEQKALYL PNLVSGRWSG TMNLTEPDAG SDVGALRCKA IEQADGSYRL HGQKIFISYG EHDLTENIVH LVLARTPDAP EGVKGISLFL VPKFLVNPDG SLGARNDVRC VSTEHKLGIH GSPTCVLAYG DREGATGYLV GEKNRGLQAM FVMMNMARLI VGLEGVALSE RAYQQALDYA RERIQGVDAL SGEPVAIVRH PDVRRMLLSM KSQIEAMRAL SLVIAQAQDL AQRHADPEVR RRNQAFVELL TPVFKAWATE NGIRLTQLGV QIHGGMGFVE ETGAAQHLRD AVIGVIYEGT TGIQAADLVG RKLARDGGAA FAALLRDMSD VAEELQRHRD LGDIGSGLAG GIASLRQAGE HILPLYRDDA QAALAVSVPF LMLAGTVAGA WQHGRGALAA ARLIEARGEP GAFLKGKLVS ARFYVAHVLV QALALAETVR CGAAPVAESA DFLC
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