| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17330 |
|---|
| Symbol | |
|---|
| ID | 7760668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1717080 |
|---|
| End bp | 1717715 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643804632 |
|---|
| Product | Two-component response regulator, LuxR family |
|---|
| Protein accession | YP_002798921 |
|---|
| Protein GI | 226943848 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCG TCCTCATCGT CGACGACCAC CAACTGTTCC GTTCCGGCCT GAGTCGATTG
CTGTCCGAAG ATCGAAAAAT AGCCGTGGAA GGCGAAGCCG CTTCGCTTCC GCAAGCCATG
GAAATCCTGC GTCGACAGAC CTTCCATGTC GCCATCGTGG ATATCAACCT GGCGGGCCGC
AGCGGGCTGG AACTTCTTTC GCGCATCCGA CACGACTGGC CCAGGCTGCC CGTGCTGATG
ATCTCGATGT ACCCGGCCGC GCAGTTTTCC GCCGTGGCCT TTCAAAAAGG GGCCAGTGGA
TATCTATCGA AGGATGTCGA GCCCGGCGAA TTGCTCCGGG CGGTGAAAAC CGTCGCCAAG
GGTGGACAAT ACGATGCCTC GCATCCATCG GCCACGCCCG CCCAGGTCGC CGACGAGCGA
TTCGCGAACC AGCCGCATCT TCGCCTCACG GATCGGGAAA TGCAGATATT CAACCTCATC
GTCACCGGCG CCAGACTCAC CGAGATCGGC GAACGTATCC TCCTGAGCGT CAAGACCGTG
AGCACCTACA AGACCCGGAT AATGGAAAAG CTCGGGGTCA ATAACAACGC CGAGCTGATC
CAATACGCGA TACGTCACGG AATATTGATC GAGTAG
|
|---|
| Protein sequence | MISVLIVDDH QLFRSGLSRL LSEDRKIAVE GEAASLPQAM EILRRQTFHV AIVDINLAGR
SGLELLSRIR HDWPRLPVLM ISMYPAAQFS AVAFQKGASG YLSKDVEPGE LLRAVKTVAK
GGQYDASHPS ATPAQVADER FANQPHLRLT DREMQIFNLI VTGARLTEIG ERILLSVKTV
STYKTRIMEK LGVNNNAELI QYAIRHGILI E
|
|---|
| |