Gene Avin_17320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17320 
Symbol 
ID7760667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1715867 
End bp1717075 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content60% 
IMG OID643804631 
Productouter membrane porin 
Protein accessionYP_002798920 
Protein GI226943847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCA GCGGGGACTT CCTGGCCGAT AGCAAGGCTA CCCTGACATT GCGGAATTTC 
TATATGGATC GCGACTACAA GGGCGACGCC ACGCGTTTTC AGTCGCAGTC GCGTCAGGCG
GAATGGGCAC AGGGTTTCAT ATTGAATGTT CAATCCGGTT ATACCGAAGG ACCTGTCGGC
TTCGCCGTCG GCCTGACGAG CAAGACCGGC GTCAAGCTCG ATTCCTCCCC CGATCGCGTG
GGCACCGGCT TGCTCGCATA TGGGCCGGAT GGCAAGGCGG AGAGCAGTTA CAGCCAGTTC
GATTTCGTCC TCAAGGCGCG CGCCGCGCAG ACCGAACTGG CCGTCGGCGG TCTGACGCCC
ATGGTGCCGA TACTGGTTTC GCCGACGGTG CGCCTGTTTC CGCCGGTGTT TCGCGGCGCG
CAGATGAAGT CGGGGGAATT TCGCGATCTC ACCCTGCACG CGGGCTATTT CGATCGCATC
GAGGAGCGCA ACTCCACCAA CTTCGAGGCA TTGCGGATAG CCAGCCCCTG GGGGCGTTTC
GAGTCCAGCG CCGAGGGCAG TCACTTCGCT TTCGTCGGCG CCGATTACCG TTGGACTCCC
GGGCTGGTCA CGAACCATTA CTTCGGCTAT CTCGACGATG TGTACAAGCA GCATTACCTG
GGCGTGCAGT TCAGCCATGC CCTGGGGCCC GGCAAGTTGC AGCATGATTT TCGCTATTTC
TCCAGCAGCG AGCAGGGCGA GGCGCGGGCC GGGGATATCG ACAATCGCTA TGCGGGATTT
TTCTCGACCT ACAAGTACAA GGGGCATGCG TTCGGCGCCG GTTACTACCG GATTTTCGGC
GAACACGGGT TCGTCGGCAT AAACGCGACC TTCACGCACA CGCACAGCCA GGGACTACTC
GACGGCGAGA TGGGCAACCC GGACGAGCGG GTATGGCAGG TGCGTTACGA TTACGACTTT
GCGGCAAGCG GGTTGCCCGG CCTGCTGGCT ACGTTTCGCT ATGCCGATGG CAGTCACATA
AACATGCCCG CCTTCAGTGC CAGCAGGGCG CACGAAAGCG AGCGATATCT GGAGCTGTCC
TATGTGATCC AGTCGGGGCC GCTGAAGGAT ATGGCGTTTC GCGTTCGCCA GGCCGATTAC
CAGAGTAGTT ATTCCCGCGA TGTGAACGAG TTGCGGATAA ACATGGACTA CACCATCGCC
ATCTGGTGA
 
Protein sequence
MPASGDFLAD SKATLTLRNF YMDRDYKGDA TRFQSQSRQA EWAQGFILNV QSGYTEGPVG 
FAVGLTSKTG VKLDSSPDRV GTGLLAYGPD GKAESSYSQF DFVLKARAAQ TELAVGGLTP
MVPILVSPTV RLFPPVFRGA QMKSGEFRDL TLHAGYFDRI EERNSTNFEA LRIASPWGRF
ESSAEGSHFA FVGADYRWTP GLVTNHYFGY LDDVYKQHYL GVQFSHALGP GKLQHDFRYF
SSSEQGEARA GDIDNRYAGF FSTYKYKGHA FGAGYYRIFG EHGFVGINAT FTHTHSQGLL
DGEMGNPDER VWQVRYDYDF AASGLPGLLA TFRYADGSHI NMPAFSASRA HESERYLELS
YVIQSGPLKD MAFRVRQADY QSSYSRDVNE LRINMDYTIA IW