| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16170 |
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| Symbol | gspE |
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| ID | 7760552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1595326 |
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| End bp | 1597035 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643804517 |
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| Product | type II secretion system protein E, GspE |
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| Protein accession | YP_002798807 |
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| Protein GI | 226943734 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTCC CGTGGATTGG GGCTTTCCCG CTGGTATTCC GAGGGGTGGC GATGAGATTG
GGTGAACGGC TGGTCCGGGC CGGGCTGGTC ACTGAGGATG ATGTGCAGCG CGCCTTGGGG
TTGCAGCAGC AGGCGGGTGG CCGGCTCGGC TCCATTTTCA TTCGCATGGG CGCGCTTTCC
GAGGATGCCT TGCTGGTTGT GCTGCATGAG CAGTTGGGGT TGCCGGTTCT GGACGGGGCC
GGGATGCCGG TCCCGTCCAC TGCCTACGCC TTCATGTCCG GTCTTCCGTT ACGGCTGGGC
TGGTTGCTCG ACAACAATGT AGTGCTGTGG GAAGAGGCCG GCAGGGTGCA CGTATTGGCC
AAGGACCCGA ACGATTCGCG GATCGGGGAT CTGCTGGGCT ACACCTTCGG TGACCGGGAA
CTGGTGCGCT ATCTGGCCCG CGCTCAGGAT GTCGACACGC TCGTCGATCA GGTGCGCAGG
GAGAGCGCCG TATCCGATCT GTTTCGCGAT GATCGCCAGA CCCTCAAGAG CCTGATCGAA
GAAGCGCCGG TCGTCGAGCT GGTGAACAAT CTCCTGGCGC AGGCGGTCGA TTCGGGAGCT
TCCGACATTC ATGTCGAGCC CGAGGAGACC CGTTTTACCG TGCGGATGCG AGTCGACGGC
GTTCTGCACA CGCGCATGGT GCAGCCTTAC GAGCGTTATC CGGCGATCGG TTCGCGCATC
AAGCTGATCG CCGGGCTGGA TATCGCCGAG AAGCGTTTGC CGCAGGATGG CCGGATTACC
TTGCGCCTGA GCGGAAAGGA CATGGATATC CGGGTTTCCA CGGCGCCGGG AGTTTTCGGC
GAGTCGATCG TCATGCGGTT GTTGCCGAAG AACCGTGGTG CCCTGTCGCT GGGCAGCCTG
GGTTTCGAGT CCGACCATAT CGAGTTGCTC AGGCAGTGGC TGGCATTTCC TAATGGCATT
GTGCTAGTAA CTGGGCCCAC GGGGTCCGGC AAGTCCACGA CCCTGTATTC GGCGCTCGAG
GAGATGCGCG ATGGCAGCAA CAAGATCATC ACCGTGGAGG ACCCCGTCGA GTATCAGGTA
CCGGGCGTGA CGCAGATCCA GGCGCACGCG GAAATCGGCT ACACCTTCGC TCGTGCGCTG
CGGGCCATTC TGCGCCAGGA CCCGGACACC ATCATGATCG GTGAGATTCG CGACCTGGAT
ACCGCGCAGA TCGCCATCCA GTCCGCTTTG ACAGGGCACC TGGTGTTGTC GACGCTGCAT
ACCAATGACG CGGTTTCGGC CTTCACCCGC CTGATCGACA TGGGGTTGGA GCCTTTTCTG
GTGGCCGCTT CGGTGCGCGG TGTTCAGGCG CAGCGTCTGG TGCGCAAGCT CTGCGGGCAT
TGCGCGGTGC GCGACGAGGC GCCGGCCTTG CCGGCTGCCT GGCAGGCAAT GGGACGTCGC
GTCGCGGAGG GCGACTGGAA ACGGGCATGC GGTTGTGCCC ATTGCCACCA GACCGGCTAT
CGCGGTCGCA TGGGGATATA CGAGTTGGTA CCCCTGAGCG CTTCCCTGCA GCAGTTGGTC
AATCGCCAGG CGCCTCTGCA GGAGATGAAG GCGCTGATCA AGGGTCAGGG GCACCGGGGC
CTGCTGGAGG ATGGATTGAT CAAGGCCAGC AAGGGTCTGA CCAGTATCGA GGAGGTCATG
CGTGTTGCTT GTGTCGAACA GGAATTCTGA
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| Protein sequence | MGVPWIGAFP LVFRGVAMRL GERLVRAGLV TEDDVQRALG LQQQAGGRLG SIFIRMGALS
EDALLVVLHE QLGLPVLDGA GMPVPSTAYA FMSGLPLRLG WLLDNNVVLW EEAGRVHVLA
KDPNDSRIGD LLGYTFGDRE LVRYLARAQD VDTLVDQVRR ESAVSDLFRD DRQTLKSLIE
EAPVVELVNN LLAQAVDSGA SDIHVEPEET RFTVRMRVDG VLHTRMVQPY ERYPAIGSRI
KLIAGLDIAE KRLPQDGRIT LRLSGKDMDI RVSTAPGVFG ESIVMRLLPK NRGALSLGSL
GFESDHIELL RQWLAFPNGI VLVTGPTGSG KSTTLYSALE EMRDGSNKII TVEDPVEYQV
PGVTQIQAHA EIGYTFARAL RAILRQDPDT IMIGEIRDLD TAQIAIQSAL TGHLVLSTLH
TNDAVSAFTR LIDMGLEPFL VAASVRGVQA QRLVRKLCGH CAVRDEAPAL PAAWQAMGRR
VAEGDWKRAC GCAHCHQTGY RGRMGIYELV PLSASLQQLV NRQAPLQEMK ALIKGQGHRG
LLEDGLIKAS KGLTSIEEVM RVACVEQEF
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