| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15870 |
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| Symbol | rpsA |
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| ID | 7760522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1562219 |
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| End bp | 1563898 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643804487 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002798777 |
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| Protein GI | 226943704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA GCTTTGCAGA ACTTTTTGAA GAAAGCCTGA AATCCCTCGA CATGCAGCCC
GGTGCCATCA TCACCGGCAT TGTGGTCGAC ATCGACGGTG ACTGGGTTAC CGTGCATGCC
GGCCTGAAGT CCGAGGGCGT CATCCCGGTC GAACAGTTCT ACAACGAGCA AGGCGAACTG
ACCATCAAGG TGGGTGACGA GGTTCACGTC GCGCTGGATG CAGTGGAAGA CGGCTTCGGT
GAAACCAAGC TGTCCCGCGA GAAAGCCAAG CGTGCCGAGT CCTGGCTGGT TCTGGAAGCT
GCCTTCGCTG CCGACGAAGT CGTCAAGGGC ATCATCAACG GCAAGGTCAA GGGTGGCTTC
ACCGTCGACA TCAACGGTAT CCGTGCGTTC CTGCCGGGTT CCCTGGTCGA CGTCCGTCCG
GTGCGCGACA CCACCCACCT GGAAGGTAAA GAGCTCGAGT TCAAGGTCAT CAAGCTCGAC
CAGAAGCGCA ACAACGTGGT CGTGTCCCGC CGCAGCGTCC TGGAAGCCGA GAACAGCGCC
GAGCGCGAGG CCCTGCTGGA GTCCCTGCAG GAAGGCCAGC AGGTCAAGGG TATCGTCAAG
AACCTCACCG ACTACGGCGC GTTCGTCGAT CTGGGCGGCG TGGACGGCCT GCTGCACATC
ACCGACATGG CCTGGAAGCG CATCAAGCAT CCGTCCGAGA TCGTCAACGT CGGCGACGAA
ATCGACGTCA AGGTGCTCAA GTTCGATCGC GAGCGCAATC GCGTCTCCCT GGGCCTGAAG
CAACTGGGCG AGGATCCATG GGTCGCCATC AAGGCCCGCT ATCCGGAAGG CACCCGCGTC
ATGGCTCGTG TTACCAACCT CACCGACTAC GGCTGCTTCG CCGAGCTGGA AGAGGGCGTG
GAAGGCCTGG TGCACGTTTC CGAGATGGAC TGGACCAACA AGAACATCCA CCCGTCCAAG
GTCGTTCAGG TCGGCGACGA AGTGGAAGTC ATGGTGCTGG ACATCGACGA AGAGCGTCGC
CGCATCTCCC TGGGCATCAA GCAGTGCAAG TCCAATCCTT GGGAAGACTT CTCCAGCCGT
TACAACAAGG GCGACCGCAT CACCGGTACC ATCAAGTCGA TCACCGATTT CGGCATCTTC
ATCGGCCTGG AAGGCGGCAT CGACGGTCTG GTCCACCTGT CCGACATCTC TTGGAACGAG
CAGGGCGAGG AAGCCGTGCG CCGCTTCAAG AAGGGCGATG AACTGGAAAC CGTCATCCTC
TCCGTCGATC CGGAGCGCGA GCGCATCTCG CTGGGCGTCA AGCAACTGGC GGACGATCCG
TTCTCCAGCT ACGCCTCCCT CAACGAGAAG GGCAGCATCG TGCACGGCAC CGTGAAGGAA
GTCGATGCCA AGGGCGCGAT CGTCGACCTG GGCAACGATA TCGAAGCTGT GCTGAAGGCG
TCCGAAATCA GCCGCGATCG CGTCGAAGAT GCCCGCAACG TGCTGAAGGA AGGCGACGAG
GTCGAAGCCA AGATCATCAG CATCGATCGC AAGAGCCGTG TCATCAGCCT GTCGATCAAG
GCCAAGGACG TGGACGACGA GAAGGACGCC ATCAAGGAAC TGCGCAAGCA GGAAACCGAG
GCGCCCGGCC CGACCACCAT CGGCGACCTG ATCCGTGCTC AGATGGGCAA CCAGAGCTGA
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| Protein sequence | MSESFAELFE ESLKSLDMQP GAIITGIVVD IDGDWVTVHA GLKSEGVIPV EQFYNEQGEL
TIKVGDEVHV ALDAVEDGFG ETKLSREKAK RAESWLVLEA AFAADEVVKG IINGKVKGGF
TVDINGIRAF LPGSLVDVRP VRDTTHLEGK ELEFKVIKLD QKRNNVVVSR RSVLEAENSA
EREALLESLQ EGQQVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRIKH PSEIVNVGDE
IDVKVLKFDR ERNRVSLGLK QLGEDPWVAI KARYPEGTRV MARVTNLTDY GCFAELEEGV
EGLVHVSEMD WTNKNIHPSK VVQVGDEVEV MVLDIDEERR RISLGIKQCK SNPWEDFSSR
YNKGDRITGT IKSITDFGIF IGLEGGIDGL VHLSDISWNE QGEEAVRRFK KGDELETVIL
SVDPERERIS LGVKQLADDP FSSYASLNEK GSIVHGTVKE VDAKGAIVDL GNDIEAVLKA
SEISRDRVED ARNVLKEGDE VEAKIISIDR KSRVISLSIK AKDVDDEKDA IKELRKQETE
APGPTTIGDL IRAQMGNQS
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