| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15730 |
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| Symbol | |
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| ID | 7760508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1543337 |
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| End bp | 1544485 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643804473 |
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| Product | Pseudouridine synthase |
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| Protein accession | YP_002798763 |
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| Protein GI | 226943690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC GTGAAGAGAA TTCCCCGCCT GCCGCCCAAG GCGAGAAGCT GCAGAAGGTG
CTGGCGCGCA TGGGCCTCGG CTCCCGGCGC GACATCGAGG CGCGGATCGC CGAAGGCCGG
GTGATGGTCA ACGGGACCGT CGCCACGCTC GGCCAGCGTG TCGGCCGCCA CGACGCCATC
GCCCTCGACG GCCGCCTGCT CAGGCGCGAG GAGGGCGCCG AACTGGTGCG CCGGGTGCTG
ATCTACAACA AGCCCGACGG CGAGATCTGC ACTCGCAACG ACCCGGAGGG CCGGCCGACG
GTGTTCGACC GCCTGCCGCG TCTGAAGGAG GGCCGCTGGG TCAACATCGG CCGGCTCGAC
ATCAATACCA CCGGTCTGCT GCTGTTCACC ACCGACGGCG AACTGGCCAA CCGCCTGATG
CATCCTTCCT ATGAAATGGA TCGCGAGTAC GCCGTGCGCG TGCGTGGCGA GGTCACCGAG
GAGATGCTCG AAACCCTCAA GCGCGGCGTG ATGCTGGAGG ACGGCCCGGC GCGCTTCACC
GACATCCAGG AGGCGCCCGG CGGCGAAGGC CTCAACCACT GGTTCCACTG CGTGGTGATG
GAGGGACGCA ACCGCGAGGT ACGCCGCCTG TGGGAGTCCC AGGGGCTGGT GGTGAGCCGG
CTGAAGCGGG TGCGCTTCGG TCCGGTGTTC ATGACGTCCG ACCTGGCCAT GGGCCGCTGG
CGCGAGATGA CCCAGGACGA GGTGGACATC CTCAGCCGCG AAGTGGGGCT GGAGCCGCTG
GCGCTGCCGG AGATGAAGCT CAGGTTTCGC GAGAAGATGG AGCGCCTGCA GCGCAAGTCG
GCCAAGCCGG TCGGGCGCGG CGGGGCACGC GAGCGGGTGT TGCGTCCGGC CCACGAGGGG
GCGGAGGCAC AGGAGCGCCG CGCTCCGCGC CGGCCGAAGG AGGAGCGTGC TCCGCGGGGC
CGCGGCACGC CGGTCGCCGA GCGCCCCGCC GAATCCGTCC GCAAGCGTCC GGGACGGCCG
GCCGGGGAGC GCTCGCCCGC CGAGTCGGGC GAACGTCCGG CGCGCAAGCC CGGGCCGGTG
CCGGCCAAGC GCCGCAGTCC GCCGGCCGGC GAGGGGCAGC GTCCGGGATT CGGCCGCAAG
TGCCCCTGA
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| Protein sequence | MSEREENSPP AAQGEKLQKV LARMGLGSRR DIEARIAEGR VMVNGTVATL GQRVGRHDAI
ALDGRLLRRE EGAELVRRVL IYNKPDGEIC TRNDPEGRPT VFDRLPRLKE GRWVNIGRLD
INTTGLLLFT TDGELANRLM HPSYEMDREY AVRVRGEVTE EMLETLKRGV MLEDGPARFT
DIQEAPGGEG LNHWFHCVVM EGRNREVRRL WESQGLVVSR LKRVRFGPVF MTSDLAMGRW
REMTQDEVDI LSREVGLEPL ALPEMKLRFR EKMERLQRKS AKPVGRGGAR ERVLRPAHEG
AEAQERRAPR RPKEERAPRG RGTPVAERPA ESVRKRPGRP AGERSPAESG ERPARKPGPV
PAKRRSPPAG EGQRPGFGRK CP
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