Gene Avin_15530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15530 
Symbol 
ID7760488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1526762 
End bp1527445 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID643804453 
Productheavy metal response regulator, two-component 
Protein accessionYP_002798743 
Protein GI226943670 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC TGATCGTCGA AGACGAACCC AAGACCGGCC GCGCCCTGCT GCAGGGACTC 
GGCGAGGCCG GCTTCGCCGT CGATCTGGCC GTCGACGGCA CGAGCGGCGA ACGCCTGGCG
CTGGCGGGCA AGTACGATCT GCTGATCCTC GACGTGATGC TGCCCGAGCG CGACGGCTGG
CAGATCCTGA ACGCTGTGCG CCAGGCGGGC CTGGAGACGC CGGTGCTGTT TCTCACCGCC
CGCGATGCGG TGGCGGACCG GGTGCGCGGC CTGGAGCTGG GCGCCGACGA CTACCTGGTC
AAGCCCTTCG CTTTCGCCGA GTTGCTGGCG CGGGTGCGCA GCCTGTTGCG CCGCGGGCAG
GTCTCGGCCC CGGAAACCCG CCTGCAGGCC GCCGACCTGG AACTCGATCT GTTGCGCCGG
AGGGTCCGCC GCAACGGCCG GCGCATCGAG CTGGCGCCCA GGGAATTCGC CCTGCTCGAG
CTGCTGCTAC GCCGCCAGGG CGAGGTGCTG CCCAAGTCGC TGATCGCCGC CGAGGTCTGG
AACATGCACT TCGACAGCGG GACCAACGTC GTGGAAGTGG CCGTCCGCCG CCTGCGCGCG
AAGATCGACG ACGGCTTCGT GCCGCCGCTG ATCCATACGG TGCGCGGCCT GGGCTATGTC
CTCGAGGTGC GCGAGGCGCC ATGA
 
Protein sequence
MKLLIVEDEP KTGRALLQGL GEAGFAVDLA VDGTSGERLA LAGKYDLLIL DVMLPERDGW 
QILNAVRQAG LETPVLFLTA RDAVADRVRG LELGADDYLV KPFAFAELLA RVRSLLRRGQ
VSAPETRLQA ADLELDLLRR RVRRNGRRIE LAPREFALLE LLLRRQGEVL PKSLIAAEVW
NMHFDSGTNV VEVAVRRLRA KIDDGFVPPL IHTVRGLGYV LEVREAP