Gene Avin_14790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14790 
SymbolptpA 
ID7760415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1460155 
End bp1460619 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content65% 
IMG OID643804377 
ProductLow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_002798670 
Protein GI226943597 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTTC TATTCGTCTG TCTCGGCAAT ATCTGCCGTT CGCCCACTGC CGAGGGCGTG 
TTCCGCCAGC GGGCGTATGC GGCCGGACTG GGAGAGCGCA TTCGCATCGA CTCGGCCGGT
ACTGGCGACT GGCATGTGGG CAAGGCGCCG GATATCCGTG CGCGGCAGGC TGCCCGCCGG
CGCGGCTACG ATCTGGATGC CTTGCGCGCC CGTCAGGTCT GTCGGGAGGA CTTCTCCCGC
TTCGACCTGA TCCTGGCCAT GGACCATGGC AACCTGCGGG ACCTGCAGGC CATTCGCCCG
GCGGGAGCGG CTGGCGAGCT GGATCTCTAT CTGCGCCGCT ATGCGCTGGG GGAGGATGAA
GTTCCAGATC CTTATTACGC AGGCGAAGAA GGGTTCGAGC GGGTTCTCGA TCTTCTCGAA
CGGGCCGGCG ACGAACTGCT CGCCGAGATC CGGAGGCGTC TGTGA
 
Protein sequence
MRVLFVCLGN ICRSPTAEGV FRQRAYAAGL GERIRIDSAG TGDWHVGKAP DIRARQAARR 
RGYDLDALRA RQVCREDFSR FDLILAMDHG NLRDLQAIRP AGAAGELDLY LRRYALGEDE
VPDPYYAGEE GFERVLDLLE RAGDELLAEI RRRL