Gene Avin_14450 details

Gene Information

• Locus tag: Avin_14450
• Symbol: fadA
• ID: 7760381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1425627
• End bp: 1426802
• Gene Length: 1176 bp
• Protein Length: 391 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643804343
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_002798636
• Protein GI: 226943563
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCCGA ATCCGAAAGA CGCCGTCATC GTCGACTTCG CCCGCACCCC GATGGGCCGT 
TCCAAGGGCG GCATGCACCG CCACACCCGC GCCGAGAACC TTTCCGCGCA TCTCATCACC 
GAGTTACTGG CGCGCAATCC GCAGGTCGAC CCGGCGGAGG TCGAGGACGT GATCTGGGGC 
TGCGTCAACC AGACCCTGGA GCAGGGCTGG AACATCGCGC GCATGGCTGC GCTGCTGACG 
CCGATCCCGC ACGGCAGCGG CGCGCAGACC GTCAACCGCC TGTGCGGCTC CTCGATGAGC 
GCGCTGCACA GCGCGGTGCA GGCGATCCAG ACCGGCAACG GCGAGGTGTT CGTGGTCGGT 
GGCGTCGAGC ACATGGGCCA CCTGCCGATG ACCCATGGGG TCGATCCGAA CCCGAAGCTG 
TCCCTACAGG TGGCCAAGGC CGCCGGAATG ATGGGACTGA CCGCCGAGAT GCTGGCGATG 
ATGCATGGCG TGACCCGCGA GCAGCAGGAC GCCTTCGCCC TGCGCTCGCA CCAGCGGGCG 
CACCGCGCCA CGGTCGAGGG CCACTTCGCC GAGGAAATAG CGCCGATCGA GGGTTACGAC 
GAGCACGGCC AGTTGCGGGT CTTCGAGCAG GACGAGACGA TCCGCCCGGA CACCACCCTG 
GAGGGCCTGG CCAAGCTCAA GCCGGTGTTC AACCCGAAGA GCGGCACCGT CACCGCGGGC 
AGTTCCTCGC AGATCACCGA CGGCGCTTCC TGCATGATCG TCATGTCCGG CCAGCGCGCC 
AGCGACCTGG GCATCCAGCC GCTGGCCGTG GTGCGCGCCA TGGCGGTGGT CGGGGTGGAC 
CCGTCGATCA TGGGCTACGG TCCGGTGCCG GCCACCCAGA GGGCGCTGGC GCGGGCCGGA 
CTGTCGATGG CCGACATCGA CTTCGTCGAG CTCAACGAGG CCTTCGCCGC CCAGGCCATC 
CCGGTGCTCA AGGACCTCAA GCTGCTCGAC GTGCTGGACG ACAAGGTCAA CCTGCACGGC 
GGCGCCATCG CCCTGGGCCA CCCCTTCGGC TGTTCGGGAG TGCGGATTTC CGGCACCCTG 
CTGAACATCA TGCGGCAGAA GAGTGGCACC CTGGGGCTGG CGACCATGTG CATCGGTCTC 
GGCCAGGGCA TCGCCACCGT CTTCGAGCGC GCCTGA 

 

Protein sequence

MSPNPKDAVI VDFARTPMGR SKGGMHRHTR AENLSAHLIT ELLARNPQVD PAEVEDVIWG 
CVNQTLEQGW NIARMAALLT PIPHGSGAQT VNRLCGSSMS ALHSAVQAIQ TGNGEVFVVG 
GVEHMGHLPM THGVDPNPKL SLQVAKAAGM MGLTAEMLAM MHGVTREQQD AFALRSHQRA 
HRATVEGHFA EEIAPIEGYD EHGQLRVFEQ DETIRPDTTL EGLAKLKPVF NPKSGTVTAG 
SSSQITDGAS CMIVMSGQRA SDLGIQPLAV VRAMAVVGVD PSIMGYGPVP ATQRALARAG 
LSMADIDFVE LNEAFAAQAI PVLKDLKLLD VLDDKVNLHG GAIALGHPFG CSGVRISGTL 
LNIMRQKSGT LGLATMCIGL GQGIATVFER A