Gene Avin_14260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14260 
Symbolaat1 
ID7760362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1400915 
End bp1402165 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content73% 
IMG OID643804324 
Productbeta-ketothiolase 
Protein accessionYP_002798617 
Protein GI226943544 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00172773 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGCG GCGCGGGACT CCATTCGGCT TTCGACGAGG TCTGCCTGGT CGACGCCCTG 
CGCACCCCCT GGGTCGATGT GGGCGGCGCG CTGGCGCAGG TCTCGCCCAT CGACCTGGGC
ATCGCCGCGG CCCGCGGGCT GTTCGCGCGC AGCGGCATCG ACGCGGCGGA GGTGGACTCG
GTGATCGCCG GCTCGATGGC CCAGGCCAGC TTCGATGCCT ATTTCCTGCC GCGTCACATC
GGCCTGTACA GCGGCGTGCC GCTGGGCGTG CCGGCGCTGG CGGTGCAGCG CATCTGCGGC
ACCGGCTTCG AGATATTGCG CCAGGCCGGC GAACAGATCG CCCAGGGCGC CGCCGGCCTG
GCGCTGTGCG TGGCCAGCGA GTCGATGTCG CGCAGCCCGA TCGCCGCCTA CACGCATCGC
GGCGGTTTCC GCCTCGGCGC GCCGGTGGAG TTCAAGGACT TCCTCTGGGA GGCGCTGTTC
GATTCGGCCG TCGGCATCGA CATGCTGCAG ACCGCGGAAA ACCTCGCCCA GTGCTACGGC
ATCGGGCGCG AGGCGGTCGA CCGCTTCGCC GCCCTGAGCT TCGCGCGTGC CTTGGCGGCG
GCGCAGGAGG GCTGGTTCGC CGGCGAGATC CTGCCGCTGC AGCGCGCGCG CTTCGTCCTC
GACGGTTGCC GCGAGCGCGG CCTCGAACTG CCGCGCGGGG TCGAGACGCT GACGCGCGAC
AGCCACGTGC GCGCCTCGTC CTTCGAGACC CTGCAGGCGC TGCGCCCGGT GCACGCCGGC
GGCGTGCAGA CCGCCGGCAA CAGTTGCGCG GTGGTGGACG GCGCCGCCGC CGCGCTGGTC
GGCGCCTGCC GCGACTTCCC CGGCGCCCGT CCGCTGGCCT GGCTGCGTGC GGCCACGGCC
TGCGGCGTGC CGCCCGAACT GATGGGCATC GGCCCGGTGG CGGCGATCCG CCTGCTGCTC
GAACGCAGCG GACTGGGCCT GGCGGACATC GGCCGCTTCG AGATCAACGA GGCGCAGGGC
GCGCAGATCC TCGCCGTGCA GCGCGAACTG GAGATCGACA CGGAACGCCT GAACGTCCAC
GGCGGAGCCA TCGCCCTCGG CCATCCGCTG GCCGCCACCG GCCTGCGCCT GACCCTGACC
CTGGCGCGCC AGTTGCGCGC CGCCAACCTG CGCTATGGCG TGGCCGCGGC CTGCATCGGC
GGCGGCCAGG GCATGGCCGT GCTGATCGAG AATCCCGATT ACCGGCGCTG A
 
Protein sequence
MRRGAGLHSA FDEVCLVDAL RTPWVDVGGA LAQVSPIDLG IAAARGLFAR SGIDAAEVDS 
VIAGSMAQAS FDAYFLPRHI GLYSGVPLGV PALAVQRICG TGFEILRQAG EQIAQGAAGL
ALCVASESMS RSPIAAYTHR GGFRLGAPVE FKDFLWEALF DSAVGIDMLQ TAENLAQCYG
IGREAVDRFA ALSFARALAA AQEGWFAGEI LPLQRARFVL DGCRERGLEL PRGVETLTRD
SHVRASSFET LQALRPVHAG GVQTAGNSCA VVDGAAAALV GACRDFPGAR PLAWLRAATA
CGVPPELMGI GPVAAIRLLL ERSGLGLADI GRFEINEAQG AQILAVQREL EIDTERLNVH
GGAIALGHPL AATGLRLTLT LARQLRAANL RYGVAAACIG GGQGMAVLIE NPDYRR