Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_13500 |
Symbol | rsuA |
ID | 7760292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1317174 |
End bp | 1317866 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643804252 |
Product | Pseudouridine synthase, Rsu A |
Protein accession | YP_002798551 |
Protein GI | 226943478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTTG ACCGCTTTCT CGGCAACCTG CCCGACTTCA ACCGCCGGAA TTCACGCCTG CTCCTGGCCA GCGGACGAGT ACGGGTCGAT GGTCAGGTAG TTCGCGACGG CTGCAGCGAA ATTCGCGAGT TCAGCAGGAT CGAAGTGGAC GGCAGGATCC TGCAGCCCGG CAGAGCAGCG CTTTATTTCA TGCTGCACAA GCCCGCAGGA GTGGTCAGCG CCACTCGCCA TGAACGGCAC CGTACCGTGC TCGATCTACT GGACGAGCCG GACAGGCAGG GACTGCATCT GGCCGGGCGC CTCGACCTCG GAACCACCGG CTTGCTATTG CTCACCAACG ACGGGCATTG GTCACGCCGA ATCACGCATC CACGATACAA GCTGGCCAAG GTGTATTACG TGGAAACCGC CGAGCCGATC GGTGAGGAAT ACATCGAAAC ATTCGCTCGT GGCCTCTATT TCGCCTTCGA GGATCTCGTT ACCCAGCCTG CCCACCTGGA ACTGCTCGGC AGCCACAGTG CCCGACTGAC GCTGTTCGAA GGACGCTACC ACCAGGTCAA ACGGATGTTC GGATACTTTC GCAACCCAGT GCTGCGCCTG CACCGGGAAA GCATGGGACC GCTACGACTG GAGTCAGAAC TGCCCCCCGG TCACTATCGC CCTTTGACAA GCGAGGAAAT CCAACTGATT TGA
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Protein sequence | MRLDRFLGNL PDFNRRNSRL LLASGRVRVD GQVVRDGCSE IREFSRIEVD GRILQPGRAA LYFMLHKPAG VVSATRHERH RTVLDLLDEP DRQGLHLAGR LDLGTTGLLL LTNDGHWSRR ITHPRYKLAK VYYVETAEPI GEEYIETFAR GLYFAFEDLV TQPAHLELLG SHSARLTLFE GRYHQVKRMF GYFRNPVLRL HRESMGPLRL ESELPPGHYR PLTSEEIQLI
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