| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_13390 |
|---|
| Symbol | |
|---|
| ID | 7760281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1303969 |
|---|
| End bp | 1305984 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643804241 |
|---|
| Product | Sensory histidine protein kinase |
|---|
| Protein accession | YP_002798540 |
|---|
| Protein GI | 226943467 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.318892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTGC GTCAGCGTCT CGAAAATCTG CCGGTCGGCC GCAAGCTCCT GGCAGCCCTG
GTGGTCCTGC TTGCCACGGT GCTGCTGCTG GCCAATCTGG CCTTCATCAG CGCGGCCTAC
TGGATCTCCC AGCAAAACAT GACCCCTCAG GCGCTGGGCG TACTGGGCCA CCTGATCGCC
AGCCCGTCAC TCGCCGGGCA GGTCCTCTCC TCGCCGGAGG CGGCCCATGA GGTGCTCCTG
CGTCTGGAGT CCTATGCCCC GCTGCGCAGC GCAGCCCTGT ATGGCCGCGA CGGTCGCCTG
CTCGCCCGGA TACAGCGGGG CGAGCCGCTG CACTTGCCGG AACATGTCGA CAAGGTGCCG
ACCTGGCAAC AACTCGAATT TCGCGTCACC CAGTTGATCG AGCTGCCACA GCCGGACCAG
CCTTCCGGCC ATCTGCTGCT GGTCGCCTCC AGCGAATTGC CGGGCGCCTT CTACACGGGC
ACTCTCACCG CCAGTCTGTT GATCCTGGCT TTCAGTGTCC TGCTGTGGAT GCTGGTGGCC
CGCCAGATCC GACGGCTGAT CACCCGGCCG ATCCGCAAAC TGGAGGAGCT TTCGCGCCGG
GTCACCCTCG AGGAGAACTA CTCGCTGCGC GCCCTACGCG GCAACAGAGA CGAAATCGGC
AACCTGGCCG ATGCTTTCAA CACAATGCTG TCGCGCATCG AGGCCCGCGA ACAACAGCTC
AAGCGTGCCC GCGACGAGGC GCAAAACGCC TTCGACCAGG CCCAGAGCCT GACCGAGGAA
ACCCGCCGCT TCAATCGCAA ACTGGAACTG GAAGTCCAGG TGCGCAGCAA GATCGAGAAG
AAGCTCACCG GCTTCCAGAA CTATCTCAAC AGCATCATCG ACTCGATGCC CTCGGCCCTG
ATCGCCCTCG ACGAGCAGCT CTACGTCACC CAGTGGAACC AGGAAGCTAG CAGCCTCTCC
GGGACGCCCC TGCACGAGGC CCTGAACCAG CCGATCTTCC TCGCCTTTCC GCCGTTGCAG
CCGTTCCTCG ACCAGCTCAG GCATACCGCC GAACTCCACC AGGTGGAGAA GATCGAGCGC
ATCACCTGGC CGCGCAACGA CGAACCCCGC CACTACGCAC TGACTTTCTA TCCGCTGATG
GGCGGCGGCG GGCGGGGTGT GGTGATCCGC ATCGACGACA TCACTCAGCG CCTGTCCATG
GAAGAGCTGA TGGTACAGTC GGAGAAGATG CTGTCGGTCG GCGGCCTCGC CGCCGGCATG
GCTCACGAGA TCAATAATCC ATTGGGTGCC ATCCTGCACA ACGTGCAGAA CATCCGTCGG
CGCCTGTCGC CGGAGCTGCC GAAAAACCTC GAACACTCGG AGGAGTGTGG CATCTCGCTG
ACTGCGGTGA ACGACTACCT GGATCGGCGC GGAGTGCCGC AACTGCTCGA CGGCATCCAG
CAGGCCGGAT CCCGCGCGGC GAAGATCGTC AGCCACATGC TCAGCTTCAG CCGGCGCAGC
GACCGGCAAC TGAGCCCGAG CCTGCTCCCG GCGCTGATCG ATCAGGCCCT GGAAATCGCC
GGCAACGACT TCGCCCCGGC CGAGAGCTTC GACTTCAAGA ACATCCGCAT CCTGCGCGAT
TTCGATCCGA GCCTCGGTCC GGTACTGGTC ATCGCCAACG AACTGGAGCA AGTGCTGCTC
AACCTGCTGA AGAACGCCGC CCAGTCCATC CACCAGCGCC AGAGCGGACC GCCTGGGCGC
ATCGTGCTGC GCACCCGCCG TAATCCGCCA TGGGCGGAGA TCACTGTCGA GGACAACGGT
GTCGGCATTC CCGAAAATGT ACGCAAACGC ATCTTCGAGC CGTTCTTCAC CACCAAGGAG
GTCGGCCAGG GCACCGGTCT CGGCCTGTCG GTGTCCTACT TCATCATCAC CAACAACCAC
AAGGGACAGA TGGAGGTGCA ATCGCGCCCG GGCCAGGGCA GCAGCTTCAC CCTCCGCCTG
CATCTGGCCG AGTCCCCGGA AGGCGCCGAA CTCTGA
|
|---|
| Protein sequence | MGLRQRLENL PVGRKLLAAL VVLLATVLLL ANLAFISAAY WISQQNMTPQ ALGVLGHLIA
SPSLAGQVLS SPEAAHEVLL RLESYAPLRS AALYGRDGRL LARIQRGEPL HLPEHVDKVP
TWQQLEFRVT QLIELPQPDQ PSGHLLLVAS SELPGAFYTG TLTASLLILA FSVLLWMLVA
RQIRRLITRP IRKLEELSRR VTLEENYSLR ALRGNRDEIG NLADAFNTML SRIEAREQQL
KRARDEAQNA FDQAQSLTEE TRRFNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAL
IALDEQLYVT QWNQEASSLS GTPLHEALNQ PIFLAFPPLQ PFLDQLRHTA ELHQVEKIER
ITWPRNDEPR HYALTFYPLM GGGGRGVVIR IDDITQRLSM EELMVQSEKM LSVGGLAAGM
AHEINNPLGA ILHNVQNIRR RLSPELPKNL EHSEECGISL TAVNDYLDRR GVPQLLDGIQ
QAGSRAAKIV SHMLSFSRRS DRQLSPSLLP ALIDQALEIA GNDFAPAESF DFKNIRILRD
FDPSLGPVLV IANELEQVLL NLLKNAAQSI HQRQSGPPGR IVLRTRRNPP WAEITVEDNG
VGIPENVRKR IFEPFFTTKE VGQGTGLGLS VSYFIITNNH KGQMEVQSRP GQGSSFTLRL
HLAESPEGAE L
|
|---|
| |