Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_12840 |
Symbol | kpsF |
ID | 7760226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1249489 |
End bp | 1250523 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643804186 |
Product | Arabinose 5-phosphate isomerase protein |
Protein accession | YP_002798485 |
Protein GI | 226943412 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAAT ATGACCTTTA CCGCTATAAT CGACGCCTTT TTCAAGCGAC GAGCCGCCCT ATGCCACACT CGAGCAACCC GATCCAGTCA GCCCAACGCA CCATACGCCT GGAAATCGAG GCCATCGAGG CGCTTCTTGC ACGCATCGAC GATACGTTCA CCACGGCCTG CAAACTGATT CTCGAGTGCA AGGGGCGGAT AGTGGTCGTC GGCATGGGCA AATCCGGGCA CATCGGGCGC AAGATTGCCG CCACCCTGGC GAGTACCGGA ACACCGGCAT TCTTCGTCCA TCCCGGCGAA GCCAGCCACG GAGACATGGG CATGATCACA CGCGACGATC TGGTCCTGGC CCTTTCCAAC TCCGGCTCCA CCGTGGAGAT CCTTACCCTG CTGCCACTGA TTCAACGCCT TGGCATCACC CTGATCAGCA TGACCGGCAA TCCAGACTCT CCCCTGGCAG GAGCGGCTAC CGTCAATCTC GACGCCGGCG TCAGCCAGGA AGCCTGTCCG CTCAATCTGG CGCCCACCTC ATCCACCACG ACCGCCTTGG TGCTCGGCGA CGCACTGGCC ATCGCCCTGC TCGAGGCGCG AGGCTTCACC GCCGAGGACT TCGCCTTCTC CCACCCCGGC GGCGCTCTCG GCCGTCGCCT GCTGCTGAAG GTGGAAAACA TCATGCACGC CGGCGATAGC CTGCCCTGCG TGCAGCGCGG CACCACGCTG CGCGAAGCGC TGCTGGAAAT GACCCACAAG GGGCTTGGCA TGACCGTGGT GCTCGAGACC GATGGACGTT TGGCCGGCAT CTTCACGGAC GGCGACCTGC GTCGCGCCCT GGATCGCAAT ATCGATGTGC GCCAGGCCAC CATCGACGAA GTGATGACCC CGCACGGCAA GACCGCACGC GCAGGAATGC TCGCCGCCCA GGCCCTGAAA ATCATGGAAG ACCACAAGAT CAACGCCCTG GTGGTGGTAG ACGAGGAGGA TCGTCCGGTC GGCGCCTTGA ATATGCACGA TCTGCTGCAG GCGGGGGTTC TGTAA
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Protein sequence | MSKYDLYRYN RRLFQATSRP MPHSSNPIQS AQRTIRLEIE AIEALLARID DTFTTACKLI LECKGRIVVV GMGKSGHIGR KIAATLASTG TPAFFVHPGE ASHGDMGMIT RDDLVLALSN SGSTVEILTL LPLIQRLGIT LISMTGNPDS PLAGAATVNL DAGVSQEACP LNLAPTSSTT TALVLGDALA IALLEARGFT AEDFAFSHPG GALGRRLLLK VENIMHAGDS LPCVQRGTTL REALLEMTHK GLGMTVVLET DGRLAGIFTD GDLRRALDRN IDVRQATIDE VMTPHGKTAR AGMLAAQALK IMEDHKINAL VVVDEEDRPV GALNMHDLLQ AGVL
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