Gene Avin_12770 details

Gene Information

• Locus tag: Avin_12770
• Symbol: ptsN
• ID: 7760219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 1244568
• End bp: 1245032
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643804179
• Product: PTS IIA-like nitrogen-regulatory protein
• Protein accession: YP_002798478
• Protein GI: 226943405
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGAC TCGAAGACAT TCTGACCCCC GGCCGTTCCC TGGTGAACGT GCCGGGAGGA 
AGCAAGAAAC GCGCTCTCGA ATACATAGCC AATCTGGTCG CCCGCGAAAT GCCCGATCTG 
AATCAGCAGA CGATTTTCGA GAACCTGATT GCCCGTGAAA AACTGGGCTC GACCGGTTTC 
GGTAACGGCA TCGCCATTCC TCATTGCCGC CTGCCCGGCT GTCCTGCCCC GATCAGTGTC 
CTGCTGCGGC TGGATGCGCC GATCGACTTC GATGCCATCG ATGGCGCTCC GGTAGACCTT 
CTGTTCGTTC TGCTGGTGCC GGAAGCCGCC ACCGACGAGC ATTTGCAATT GCTTCGCCAG 
ATTGCCAGCA TGCTCGATCG TAGCGAGGTG CGCGAGCGCC TGCGCCAGGT CGAGAGCAGC 
GAGGCCCTTT ACCAGGTGGT CGCGGACGCA CAGAAGAGCC TGTAA 

 

Protein sequence

MIRLEDILTP GRSLVNVPGG SKKRALEYIA NLVAREMPDL NQQTIFENLI AREKLGSTGF 
GNGIAIPHCR LPGCPAPISV LLRLDAPIDF DAIDGAPVDL LFVLLVPEAA TDEHLQLLRQ 
IASMLDRSEV RERLRQVESS EALYQVVADA QKSL