Gene Avin_12590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12590 
Symbol 
ID7760202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1225299 
End bp1226405 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID643804162 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_002798461 
Protein GI226943388 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.483564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCT GGGACGGACC CCGAATGAAT CCTCTGACCT TCATCTGCCT GATCGCCGGC 
CTGGCCCTGC TGATCGCCGG CGCCGAAGCC CTGGTCCGCG GCGCCGCACG CCTGGCCGCC
CGCTTCGGCA TTCCGCCGCT GATCATCGGC CTGACCGTGG TGGCCTTTGG CACCAGCGCC
CCGGAAATGG CCGTCAGCGT GCGATCAGCC AGCGGCGGAC AGGGCGATAT CGCGGTCGGC
AACGCCATCG GCAGCAACAT CTTCAACGTG CTGATGATCC TCGGCCTGTC CGCACTGGTC
ATTCCGTTGC GGGTTTCGCG TCAACTGATC CGTTTCGACG TACCCGTCAT GATCGGCGTC
AGCCTGCTGG CCTGGCTGCT GGCCATCGAC CGCGAGTACG GCCGTCCGGA TGGAGCGCTG
CTGTTCGCCG GCATTCTCGC CTACATCGCC TTTCAGGTGC GCAGCGGCCT GAATGCCGGA
ACCAGCGGCG ACGGCAACGA ATTCGAGACG GAGTTCGGCA GGAAGCCCGA GGGACGCCTC
GCCCTGCCTG GCCACCTGGC GCTCGTCGCC CTCGGCCTGG CCATGCTGGT CTGGGGCTCC
GACCTGCTGA TCGATGCCAC GGTGACCCTG GCCCGAGCGC TCGGCCTGTC CGAACTGGCG
ATAGGCCTGA CCATGGTCGC CGCCGGAACC TCGCTGCCGG AACTGGCCAC GTCGCTGGTG
GCCGCCATCA AGGGCGAGCG CGATATCGCC GTGGGCAATA TCGTCGGCAG CAATATCTTC
AACCTGCTCG CGGTCCTCGG CCTGGCCGCG CTGGTCTCGC CCGCCCCGAT CGAGGTATCG
CCCAACGCCC TGGCCTTCGA CTACCCGGTG ATGATCGCGG CGGCGGCGGC CTGCCTGCCG
ATCTTCCTCA CTGGCTACCG CATCGGCCGC TGGGAGGGGT TGCTGTTCTT CGGCTACTAC
CTGGCCTACG GCGCCTACCA GGTACTGTTC GCCAGCGGCG CTTCCGCCGT AGACCTGCTG
CACGACGCCC TGGCCTGGTA CGCCCTGCCG CTGACCGCCG TGACGCTGCT GGTCATCGCC
GTCCGCGGAT GGCGGCAGCG AGGCTGA
 
Protein sequence
MTAWDGPRMN PLTFICLIAG LALLIAGAEA LVRGAARLAA RFGIPPLIIG LTVVAFGTSA 
PEMAVSVRSA SGGQGDIAVG NAIGSNIFNV LMILGLSALV IPLRVSRQLI RFDVPVMIGV
SLLAWLLAID REYGRPDGAL LFAGILAYIA FQVRSGLNAG TSGDGNEFET EFGRKPEGRL
ALPGHLALVA LGLAMLVWGS DLLIDATVTL ARALGLSELA IGLTMVAAGT SLPELATSLV
AAIKGERDIA VGNIVGSNIF NLLAVLGLAA LVSPAPIEVS PNALAFDYPV MIAAAAACLP
IFLTGYRIGR WEGLLFFGYY LAYGAYQVLF ASGASAVDLL HDALAWYALP LTAVTLLVIA
VRGWRQRG