Gene Avin_12550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12550 
Symbol 
ID7760198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1221042 
End bp1222286 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID643804158 
Productperiplasmic sensory histidine protein kinase 
Protein accessionYP_002798457 
Protein GI226943384 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.418352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCGG CCAGCCGCCA CAACCTCCGT CGGCTCATCC TGATCCGTGT CCTCGTGCTG 
GCCGCCCAGG CCGGTTCGGT CGGGCTCGCC TATCTCACCG ATCTGATGCC GTTGCCCTGG
CTGGCGCTCG CTTTCACCCT CAGCCTGTCG GCCATGCTTT GCCTGGGAAC CGCTCTGCGC
CTGACCATGT CGTGGCCGGT GACCGATCTG GAATACGCCG GCCATCTGGC TTGCGATCTG
ATCATCCACA GCCTGCTGCT GTATTTCACC GGCGGTCCGA CCAACCCCTT CGTTTCCTAT
TACCTGGTGC CGCTGACCAT CGCCGCGGCG ACCCTGCCCA GGCGGCACAC GGTGATGCTC
GCCGGCCTGG CGTTCGTGGC CTACACCCTG CTGGTCTTCT GGTACAACCC GACTACCCTG
CCGCCGGAGC ATCGCGTCAC CCTGCTGATC TACGGCATGT GGCTGAGCTT CGCCCTGGCG
GCGGCGTTGA TCACCTTCTT CGTCGGGCGG ATGGCCGGCG AACTGCGTCG TCAGGAGGAG
TTCCAGGCCA CGCGCCGCGA GGAGGGCATG CGCGACCAGC AACTGCTGGC GGTGGCTACC
CAGGCGGCCG GCGCCGCCCA TGAGCTGGGC ACGCCGCTGG CGACGATGAG CGTGCTGATC
ACCGAACTGC GCCAGGAGCA CGACGATCCG CTGCTGCAGG AGGATCTGGC GGTGCTCCAG
GAACAGGTGA AGCTGTGCAA GGACACCCTG CAGCAACTGG TGCGCGCCGC CGAGGCGGAT
CGCATGCAGA CGGTCCAGGA GCAGAGCGCG GCGGCCTGGC TGGAGACGGC GCTCAATCGC
TGGCACCTGA TGCGCCCGGA AGCGAGCTAT CGCTACGAGA TCCTCGGCAC GGGTTCCATG
CCGCGCCTGG CGCCGTCGCC GGACCTGACC CAGTCGCTGC TCAACCTGCT CAACAACGCC
GCCGATGCCT GTCCGGACGA CCTGGACATC TACCTCGACT GGGACGTCGA GGAGTTGTGC
ATCAGCATCC GCAACCATGG CGAAGGCGTG CCGCTGGCGA TCGCCGAGCA ACTGGGCAAG
CCTTTCTTCA CCACCAAGGG CAAGGGCTTC GGCCTCGGCC TGTTTCTGAG CCAGGCCAGC
GTGACTCGCG CCGGCGGCTC GGTGAAACTC TACAATCACG AGGAGGGCGG TACGCTGACC
GAGCTGCGGC TGCCGCGCCT GGGGCCAGGA GACTACTATG AGTGA
 
Protein sequence
MLSASRHNLR RLILIRVLVL AAQAGSVGLA YLTDLMPLPW LALAFTLSLS AMLCLGTALR 
LTMSWPVTDL EYAGHLACDL IIHSLLLYFT GGPTNPFVSY YLVPLTIAAA TLPRRHTVML
AGLAFVAYTL LVFWYNPTTL PPEHRVTLLI YGMWLSFALA AALITFFVGR MAGELRRQEE
FQATRREEGM RDQQLLAVAT QAAGAAHELG TPLATMSVLI TELRQEHDDP LLQEDLAVLQ
EQVKLCKDTL QQLVRAAEAD RMQTVQEQSA AAWLETALNR WHLMRPEASY RYEILGTGSM
PRLAPSPDLT QSLLNLLNNA ADACPDDLDI YLDWDVEELC ISIRNHGEGV PLAIAEQLGK
PFFTTKGKGF GLGLFLSQAS VTRAGGSVKL YNHEEGGTLT ELRLPRLGPG DYYE