Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_12220 |
Symbol | |
ID | 7760165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1178678 |
End bp | 1179430 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643804125 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002798424 |
Protein GI | 226943351 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTTC AATTGCAGAA CCGAAACGTA CTGGTCACCG GCGGTACCCG CGGCATCGGC CGGGCCATCG TCGAAGGCTT TTTGCGCGAA GGCGCGCGCG TGGCCTTCTG CGCCCGCGAC CCGCAGGGCG TGGCGCAGGC CGAACGGGAA CTCGGCGCGC AGGCCTTCGG CCAGGCCGTC GACGTCACCG ACGGCGCGGC GCTGGAGCAG TGGGTGAAAG ACGCGGCGGC GCGCCTGGGC GGGATCGACA TCGTCGTGCC CAATGTCAGC GCGCTGGCCG GCGGGCAGAA TCTGTCGGCC TGGCGGCAGG CCTTCGAGAC CGACCTGCTC GGCACCGTCG GCCTGGTCAA CGCCGCCCTG CCCTGGCTCG AGCGATCCGA GGCGGGAGCG ATCGTGATCA TCTCCAGCGT CTCCGGCCGG CAGATCGACC TCTTCGCGGA GCCCTACGGC GCACTCAAGG CGGCGCTGAT CCACTACGGC AAGGGCCTGG CCCTGCGCCT GGCCGGGCAG CGCATCCGGG TCAACGTGGT CTCGCCGGGC AACGTCTACT TCGAGGACGG CGTCTGGGGC CGGATCGAGC GCGAGCAGCC GGAACTCTTC GCCAGGTGCC TGGCGGCGAA CCCCATGGGC CGCATGGCGC GGCCCGAGGA AGTGGCCAAC GCCACGCTGT TCCTGGCCAG CGCGGCCGCC AGCTTCACCA CTGGCACCAG CCTGCTGGTC GACGGCGGCC TGACCCAGGC GGTCCAGTAC TGA
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Protein sequence | MDLQLQNRNV LVTGGTRGIG RAIVEGFLRE GARVAFCARD PQGVAQAERE LGAQAFGQAV DVTDGAALEQ WVKDAAARLG GIDIVVPNVS ALAGGQNLSA WRQAFETDLL GTVGLVNAAL PWLERSEAGA IVIISSVSGR QIDLFAEPYG ALKAALIHYG KGLALRLAGQ RIRVNVVSPG NVYFEDGVWG RIEREQPELF ARCLAANPMG RMARPEEVAN ATLFLASAAA SFTTGTSLLV DGGLTQAVQY
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