| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_12080 |
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| Symbol | pilC |
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| ID | 7760149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1160557 |
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| End bp | 1161774 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643804109 |
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| Product | type IV pilus biogenesis protein |
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| Protein accession | YP_002798408 |
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| Protein GI | 226943335 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.192731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAAA AAGCGTTGAA AATCAGTCTG TTCACCTGGG AGGGCATCGA CCGGCGCGGT
GCCAGGATCA AGGGAGAACT GAACGGGAGA AATCCGGCGC TGGTCAAGGC GCAACTGCGC
AAGCAGGGCA TCAATCCGAC CAGGGTACGC AAGAAGGCCG GCTCGCTGTT CGGCGGCGAC
CAGAAGATCA AACCGCTGGA TATCGCCCTG TTCACCCGGC AGATGGCCAC CATGATGAAG
GCAGGCGTGC CGCTGCTGCA GGCCTTCGAC ATCATCTCCG AGGGTTTCGA CAAACCGGCC
ATGCGCAAGC TGGTGGACGA AGTGAAACAG GAGGTGGCGG CGGGCAACGG TTTCGCCGCT
TCACTGCGCA AGAAGCCCCG CTATTTCGAC AACCTCTACT GCAACCTGGT GGAGTCCGGC
GAGCAGTCCG GCGCCCTGGA AAGCCTGCTG GAGCGGATCG CCACCTACAA GGAGAAGACC
GAGGCGCTGA AGGCCAGGAT CAAGAAGGCG ATGACCTACC CCATCGCGGT GATCCTGGTG
GCGATCGCCG TCTCGGCCAT TCTGCTGATA AAGGTGGTAC CGCAATTCCA GTCGGTGTTC
GCCAACTTCG GTGCCGAACT GCCGGCGCTC ACGCTGCTGG TCGTCAACCT GTCGGAAGTT
CTGCAGGAAT ACTGGTTCTA CGCGCTGCTC GGAATACCCA TCGCAGTTCT CATCCTGAAG
CAGGCCCACC GGCGCTCCGA GGCGTTTCGC AACTGGACGG ATCGCAGCCT GCTGAAGCTG
CCGATCGTCG GCCAAATCCT CTACAAGTCG GCGGTGGCCC GCTTCGCCCG CACCCTGTCC
ACCACTTTCG CCGCCGGTGT GCCGCTGGTC GACGCACTCG ACTCGGTGGC CGGCGCCACC
GGCAACGTGG TGTTCCGCAA CGCCACCGAG AAGGTCAAGG CCGACGTCAC CACCGGCATG
CAACTGAACT TCTCCATGCG CACCACCGGC ACCTTCCCCA GCATGGCGAT CCAGATGACC
GCCATCGGCG AGGAGTCCGG CACGCTGGAC GAGATGCTCG ACAAGGTGGC GGGCTTCTAC
GAGGCCGAAG TGGACAACAT GGTGGACAGC CTGACCGGTT TGCTGGAGCC GATGATCATG
GCGGTGCTCG GCGTGCTGGT CGGCGGCCTG ATCGTCGCCA TGTACCTGCC GATCTTCCAG
TTGGGCTCCG TGGTCTGA
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| Protein sequence | MAEKALKISL FTWEGIDRRG ARIKGELNGR NPALVKAQLR KQGINPTRVR KKAGSLFGGD
QKIKPLDIAL FTRQMATMMK AGVPLLQAFD IISEGFDKPA MRKLVDEVKQ EVAAGNGFAA
SLRKKPRYFD NLYCNLVESG EQSGALESLL ERIATYKEKT EALKARIKKA MTYPIAVILV
AIAVSAILLI KVVPQFQSVF ANFGAELPAL TLLVVNLSEV LQEYWFYALL GIPIAVLILK
QAHRRSEAFR NWTDRSLLKL PIVGQILYKS AVARFARTLS TTFAAGVPLV DALDSVAGAT
GNVVFRNATE KVKADVTTGM QLNFSMRTTG TFPSMAIQMT AIGEESGTLD EMLDKVAGFY
EAEVDNMVDS LTGLLEPMIM AVLGVLVGGL IVAMYLPIFQ LGSVV
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