Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_11810 |
Symbol | ispH |
ID | 7760123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1133015 |
End bp | 1133962 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643804083 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_002798385 |
Protein GI | 226943312 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATCA AGCTTGCCAA TCCCCGTGGT TTCTGCGCCG GCGTCGATCG CGCCATCGAG ATCGTCAACC GTGCCCTGGA GGTCTTCGGT CCGCCGATCT ACGTGCGCCA CGAGGTGGTG CACAACAAGT TCGTGGTGGA CGATCTGCGT TCTCGGGGAG CCATCTTCGT CGAGGAACTG GACCAGGTGC CGGACAACGT CATCGTCATC TTCAGCGCCC ACGGCGTGTC CCAGGCGGTG CGCCAGGAAG CCGCGCGGCG CGGGCTCAAG GTGTTCGACG CCACCTGTCC GCTGGTGACC AAGGTGCACA TGGAGGTCGC CCGCTACAGC CGCGAGGGCC GGGAGTGCAT CCTCATCGGG CACCAGGGGC ATCCGGAGGT GGTTGGCACC ATGGGCCAGT ACGATACGGC CAATGGCGGC GCTATTTATC TGGTGGAGGA TGAGGAGGAC GTCGCCCGCC TGCAGGTGCG CAATCCCGTG TCCCTGGCTT TCGTCACCCA GACCACCCTG TCCATGGACG ACGCCGCCCG CATGATCGAT GCCCTGCGCG CCCGCTTTCC GGGCATCGGT GGCCCGCGTA GGGACGACAT CTGCTACGCC ACCCAGAATC GCCAGGACGC GGTCAGGCAA CTGGCCGGCG AGTGCCAGTT GGTGCTGGTG GTCGGCAGCT CCAGCAGTTC GAACTCCAAC CGCCTGCGTG AACTGGCCGA GAGCATCGGA GTTCCCGCCT ATCTGGTCGA CGGCGCCCAG GATCTTCGTC GCGAATGGTT CGATGGCATC CGGCGCGTCG GTGTCACCGC CGGCGCTTCG GCACCGGAGG TGCTGGTACG TGACGTGATC GACCGACTGC GGCAATGGGG CGTCGTCAAC GTCGAGGAAT TGACCGGCCG CGAAGAAAAC ATCACCTTCT CGATACCGAA GGAGTTGCGG GTGGTGTCGT CGGACTGA
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Protein sequence | MHIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVDDLR SRGAIFVEEL DQVPDNVIVI FSAHGVSQAV RQEAARRGLK VFDATCPLVT KVHMEVARYS REGRECILIG HQGHPEVVGT MGQYDTANGG AIYLVEDEED VARLQVRNPV SLAFVTQTTL SMDDAARMID ALRARFPGIG GPRRDDICYA TQNRQDAVRQ LAGECQLVLV VGSSSSSNSN RLRELAESIG VPAYLVDGAQ DLRREWFDGI RRVGVTAGAS APEVLVRDVI DRLRQWGVVN VEELTGREEN ITFSIPKELR VVSSD
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