Gene Avin_11780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_11780 
SymbolileS 
ID7760120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1129173 
End bp1132004 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content66% 
IMG OID643804080 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002798382 
Protein GI226943309 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACT ACAAAGCGAC CCTCAACCTG CCGGAAACGG CATTCCCGAT GAAGGCCGGC 
CTGCCGCAAC GCGAGCCGGA GACGCTGCGG CACTGGAACA GCATCGGCCT GTACCGCAAG
CTGCGGCAGA TCGGCGAGGG ACGTCAGAAG TTCATCCTGC ACGACGGCCC GCCCTACGCC
AACGGCAACA TCCACATCGG CCATGCGGTC AACAAGATCC TCAAGGACAT GATCGTCCGC
TCGAAGACCC TGGCCGGCTT CGACGCGCCT TACGTACCGG GTTGGGACTG CCACGGCCTG
CCCATCGAGC ACAAGGTGGA AACCACCTTC GGCAAGAACC AGCCGGCGGA CCTGACCCGT
GAGCGCTGCC GTGCCTATGC CGCCGAACAG GTCGAGGGGC AGAAGGCCGA CTTCATCCGT
CTCGGTGTGC TCGGCGACTG GGAAAACCCC TACAAGACCA TGGATTTCGC CAATGAGGCC
GGGGAAATCC GCGCCCTGGC GAAGATGGTT GAGGGCGGTT TCGTGTTCAA GGGTCTCAAG
CCGGTGAACT GGTGCTTCGA CTGCGGCTCG GCGCTGGCCG AGGCGGAGGT CGAATACCAG
GACAAGAAGT CCGACGCGAT CGATGTGTTC TTCCCGGTCG GGGATGCCGA CAAGCTGGCC
GCCGCCTTCG GCCTGGCTCA GTTGGACAAG CCGGCCGGCA TCGTCATCTG GACCACCACT
CCCTGGACCA TTCCGGCCAA CCAGGCGCTC AACGTCCATC CGGACTTCAT TTATGCCCTG
GTGGATTGCG GCGACCGGCT GCTGCTGCTG GCCGAGGAAC TGGTAGAGGG CTGCCTGGCC
CGCTACGGCC TGCGGGGCCA GGTGCTGGCC ACCGCCAAGG GCGAGGCGCT GGAGCTCATC
CGCTTCCGCC ATCCGTTCTA CGAACGCTTC TCGCCGGTCT ATCTGGCCGA TTACGTCGGG
CTGGACGCCG GTACCGGCAT CGTCCACTCG GCTCCCGCCT ATGGCGAGGA CGACTTCCGT
TCCTGCAAGC GCTACGGCAT GAGCAACGAC GAGATTCTCA GCCCGGTGCA GAGCAACGGC
GTGTATGTCG AGTCGCTGCC GTTCTTTGGC GGCCAGTTCA TCTGGAAAGC CAACCCGAAC
ATCGTCGCCA AGCTCGCCGA AGTCGGCTGC CTGCTCAAGC ACGAGACGAT CAGCCATAGC
TACATGCACT GCTGGCGGCA CAAGACTCCC CTGATCTACC GGGCCACCGC GCAGTGGTTC
GTCGGCATGG ACAGCAAGGC GAAGGACGGC ACCACGCTGC GCGAACGCGC CCTGGCCGCC
ATCGAGCAGA CCCGGTTCGT CCCCGCCTGG GGCCAGGCGC GCCTGCACGG GATGATCGCC
GGCCGTCCGG ACTGGTGCAT CTCGCGCCAG CGCAACTGGG GCGTGCCGAT TCCCTTCTTC
CTGCACAAGG AAAGCGGCGA GCTGCATCCG CGTACCGTCG AGCTGATGGA GGAGGTGGCC
AGGCGTGTCG AACAGAAAGG CATCGAGGCC TGGTTCAGGC TCGACCCCGC CGAACTGCTC
GGTGCCGAGG CCGACCAGTA CGACAAGATC GCCGACACCC TGGACGTCTG GTTCGACTCC
GGCACCACCC ACTGGCACGT GATGCGCGGC TCGCATCCGA TGGGCCATGA CCAGGGGCCG
CGTGCCGATC TCTACTTGGA GGGCTCGGAC CAGCACCGCG GCTGGTTCCA CTCGTCGCTG
CTGACCGGCG CGGCCATCGA CGGCCATGCG CCCTATCGCG GCCTGCTGAC CCACGGCTTC
ACCGTGGACG AGAACGGCCG CAAGATGTCC AAGTCCCTCG GCAATGTCAT CGCCCCGCAG
GAAATCACCG ACAGCATGGG CGCCGACATC CTCCGCCTGT GGGTTTCGGC CACCGACTAT
TCCGGCGAGA TGGCGGTATC CAAGCAGATC CTCCAGCGCA GCGCCGACGC CTACCGGCGC
ATCCGCAACA CCGCGCGTTT CCTGCTCGCC AACCTCAGCG GCTTCGATCC GGCGAAGGAT
CTGCTGGCCG CCGAGGACAT GCTGGCGCTG GACCGCTGGG CGGTGGACCG CGCCCTGCTG
CTGCAGCGCG AGGTCGAGGA AGCCTTCGAC AGCTATCGCT TCTGGGTCGT CTATCAGAAG
GTGCACAACT TCTGCGTGCA GGAGCTGGGC GGTTTCTACC TCGACATCAT CAAGGACCGC
CAGTACACCT GCGCCGCCGA CAGCGTGGCG CGCCGTTCCT GCCAGAGCGC CATGTACCAC
ATCGGCGAGG CGCTGGTGCG CTGGATCGCG CCGATCCTGG CGTTCACCGC CGAGGAGATC
TGGCAGTACC TGCCGGGCGA GCGCAACGAA TCGGTGATGC TCAACACCTG GTACCAGGGT
TTCGCCGAGC TGCCGGACGG CTTCGCCCTG GATCGCGCCT TCTGGGAACA GGTCATGGCG
GTCAAGGCCG CAGTGAACAA GGAGCTGGAG AACCGGCGCA ATGCCAAGGC CATCGGCGGC
AACCTGCAGG CCGAGGTCGT CCTGTTCGCC GAGCCGGCCC TGGCCGGGCG CCTGGCCCTG
CTGGGCGACG AACTGCGCTT CGTGCTGATC ACTTCGGCCG CGCAGGTCCA GCCGCTCGGG
GCCGCTCCCG CGGATGCGGT GGACACCGAG GTCGCCGGTC TGCGCATTCA GGTGAGCAAG
TCGGTCCATA CCAAGTGCGC CCGTTGCTGG CACCATCGCG AAGATGTGGG GCTCGATCCG
GCGCATCCGG AGATCTGCGG GCGTTGCGTG GAGAACATCC AGGGCGAGGG CGAGGTCCGC
CAGTATGCAT GA
 
Protein sequence
MTDYKATLNL PETAFPMKAG LPQREPETLR HWNSIGLYRK LRQIGEGRQK FILHDGPPYA 
NGNIHIGHAV NKILKDMIVR SKTLAGFDAP YVPGWDCHGL PIEHKVETTF GKNQPADLTR
ERCRAYAAEQ VEGQKADFIR LGVLGDWENP YKTMDFANEA GEIRALAKMV EGGFVFKGLK
PVNWCFDCGS ALAEAEVEYQ DKKSDAIDVF FPVGDADKLA AAFGLAQLDK PAGIVIWTTT
PWTIPANQAL NVHPDFIYAL VDCGDRLLLL AEELVEGCLA RYGLRGQVLA TAKGEALELI
RFRHPFYERF SPVYLADYVG LDAGTGIVHS APAYGEDDFR SCKRYGMSND EILSPVQSNG
VYVESLPFFG GQFIWKANPN IVAKLAEVGC LLKHETISHS YMHCWRHKTP LIYRATAQWF
VGMDSKAKDG TTLRERALAA IEQTRFVPAW GQARLHGMIA GRPDWCISRQ RNWGVPIPFF
LHKESGELHP RTVELMEEVA RRVEQKGIEA WFRLDPAELL GAEADQYDKI ADTLDVWFDS
GTTHWHVMRG SHPMGHDQGP RADLYLEGSD QHRGWFHSSL LTGAAIDGHA PYRGLLTHGF
TVDENGRKMS KSLGNVIAPQ EITDSMGADI LRLWVSATDY SGEMAVSKQI LQRSADAYRR
IRNTARFLLA NLSGFDPAKD LLAAEDMLAL DRWAVDRALL LQREVEEAFD SYRFWVVYQK
VHNFCVQELG GFYLDIIKDR QYTCAADSVA RRSCQSAMYH IGEALVRWIA PILAFTAEEI
WQYLPGERNE SVMLNTWYQG FAELPDGFAL DRAFWEQVMA VKAAVNKELE NRRNAKAIGG
NLQAEVVLFA EPALAGRLAL LGDELRFVLI TSAAQVQPLG AAPADAVDTE VAGLRIQVSK
SVHTKCARCW HHREDVGLDP AHPEICGRCV ENIQGEGEVR QYA