| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_10460 |
|---|
| Symbol | |
|---|
| ID | 7759991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 992558 |
|---|
| End bp | 993544 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643803951 |
|---|
| Product | Anti-sigma factor, FecR family |
|---|
| Protein accession | YP_002798253 |
|---|
| Protein GI | 226943180 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.491124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGACGGC ACACCCCGCC GGGCCACGAA AGGCCGGGCC GCGACAGGCC GGGCTGCGAC
GAACGGGCCT TCGAGCGCTG GCTGGCCGCC GATCCCCGGC ATCCGGAAGC CTACGCCAGG
GCGGAGGCGG TATGGATCTG CAGCGCCGCG CCCGCCGCCC GGCTGGCCGA GGAAGAGTCG
GCCGCCCTCG CCGGCTATCT GGCGCGCATG GACGCACCCG CCAGCCGACG TCGCGGCCCG
GCCTCGCGTG GCCCGGCCTT TCGTGGCCCG GCCTGGACGC TGGCCATGGC CGCCTGCCTG
CTGCTGGTGC TCTGGACCGG CGGCTGGTGG CAGCCGCAGC GCTGGCTCGG CGACCTGCGC
GCCGACTACG TCTCGGCGCC CGGCCAGATC CGCGAACTGA CCCTGACCGA CGGCTCGCAC
CTGGTGCTGG ACAGCGACAG CGCCCTGGCG CTGCGTTTCG ACGGACGCGA ACGGCGGGTC
GAGCTGCTGC GCGGCGGCGC CGTCTTCAAG GTGGCGCACA ATGGCCAGCC CTTCGTGGTC
GGTGCCGAAG GCGGCGAGGC GCGGGTGCTG GGCACCGAGT TCGAAGTCCG CCGCCTGCGC
CGGGAGACCC GCGTCACCGT CGCCACGGGT CGGGTGGCGG TACGCGCCGA CGAAACCGCC
GAGCTGCCGC AGGCGGTGCT GCACGCCGGA CAGCGAGTGG CCTTCGCCGA CGGCCGCCTG
ACGGCTCCCG AGGCGGTCGA CAGCGGCGCC GTCCTGGCCT GGCGCCAGGG TTGGCTGGCC
TTCTACCAGA CGCCGCTGAG CGAGGTGCTG GAGCGCCTCG GCGACTACTA TCCCGGCCGC
ATCCTGCTGC TCGACGACGA TCTGGCGGCA CGCCGCGTGA CCGGCTCCTT CCCCAGCGCC
GACCCGCACG CGGTCCTCGA CTCGCTGCAG GCGGTACTCG GCTTCCGGCA GCGCGAACTG
CTCGGGCGGG TGATCGTCAT CCACTGA
|
|---|
| Protein sequence | MRRHTPPGHE RPGRDRPGCD ERAFERWLAA DPRHPEAYAR AEAVWICSAA PAARLAEEES
AALAGYLARM DAPASRRRGP ASRGPAFRGP AWTLAMAACL LLVLWTGGWW QPQRWLGDLR
ADYVSAPGQI RELTLTDGSH LVLDSDSALA LRFDGRERRV ELLRGGAVFK VAHNGQPFVV
GAEGGEARVL GTEFEVRRLR RETRVTVATG RVAVRADETA ELPQAVLHAG QRVAFADGRL
TAPEAVDSGA VLAWRQGWLA FYQTPLSEVL ERLGDYYPGR ILLLDDDLAA RRVTGSFPSA
DPHAVLDSLQ AVLGFRQREL LGRVIVIH
|
|---|
| |