Gene Avin_10080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10080 
Symbol 
ID7759953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp957031 
End bp957684 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID643803913 
ProductTranscriptional regulator, TetR family 
Protein accessionYP_002798215 
Protein GI226943142 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.530554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGAA CCAAGGCTGA TGCCGAAAAG ACCCGCGAAA ACATCCTCGC TACCGCCGAG 
CGGTTGTTTC TACGCAACGG CGTGGCCCAT ACCAGCCTGG AACAGATCGC CCGCGCCAGC 
GGCGTGACCC GTGGTGCGGT CTACTGGCAT TTCCAGAACA AGAGCCATCT GCTCAACGAA 
ATACTCGACC AGGTCCGCCC GCGGCCGGAA CAGATCGCCG AGCGGCTGAA CGCCCCGGCG 
CAAGCCTACC CCCTGCAGAA CCTGCGCGAC CTGCTCGTGG AAATCATGGC CGACCTGGCC 
GCCAACGAGC AGGAGCGCAA CATCCTGACG ATCCTGCTGA TGCGCTGCGA ATTCACCGAC 
GAATTGAGCG ACGCCCAGGA ACGCCACACC AACTTCATCA ACCAGTTCAT CGCCCTCAGC 
GAGGAACAGT TCGAACGCGA GCGGCAACGC CTGCGTCCCG GCATCAGCCC GCCCCTGGCG 
GCGCGCCTGC TGCACGCCAC CCTGGTCGGC ATGCTCAGCG ACCGCCTGCG CGATCCCGGG 
CTGTTCGACG TCCAGACCGA GGCGCCGGTG ATGATCGACG CCCTGTTCAG CGGCCTGCTC 
TGCGACTGGC GGATCGCCGG CCAGCGCCCC GTTCAGGCCG GCGCCACCTC GTAG
 
Protein sequence
MRRTKADAEK TRENILATAE RLFLRNGVAH TSLEQIARAS GVTRGAVYWH FQNKSHLLNE 
ILDQVRPRPE QIAERLNAPA QAYPLQNLRD LLVEIMADLA ANEQERNILT ILLMRCEFTD 
ELSDAQERHT NFINQFIALS EEQFERERQR LRPGISPPLA ARLLHATLVG MLSDRLRDPG 
LFDVQTEAPV MIDALFSGLL CDWRIAGQRP VQAGATS