Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_07910 |
Symbol | |
ID | 7759745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 748542 |
End bp | 750950 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643803709 |
Product | intracellular signalling protein with diguanylate cyclase and phosphodiesterase activities |
Protein accession | YP_002798011 |
Protein GI | 226942938 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.909152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGCC GACTCGCCCG ACTGTCCCTG CGCAAATCCC TGCCACTGCT GCTCGGCCTT TTCGCCGTGG TCTTCACCCT GCTGCTGACC ACCCTGTACC TGCCGCGCGC CATCGACAGG GAACTGCACG CCTGGCGCAG CCACACCGAC CAGTTGCTCG CGCTGCTGCA GAACACCCTG AGCGACCACC TGCGTCATGG CCGCCTCGCG GAGCTGGAAA CCGCGCTGAG CGAATTCGCC GGGCTGCAGG GGATCCGCTG GGCCATGGTG ACCGACCCGC AACTGCAGGT ACTGGCGACC ACCCGCCTTG GCCTCGTGCC CCGGCACCTC GGTGTCGCCG CCGAACAGCT GAAGGCCCTC ATGGCCAGCG GCCGCCCCGC CTGGCTGGAA CATGCCGGAA GGCGCTATCT GGCCATTCTC CCGCTCGACC GGAAGCTCCA GGGCAACACG GGAAACGGCG AGACGCTGCT GGTCGACCTG GACTTCAATC CGCTGCTCGA CCGAACCCGT TTCGAGGCCT GGCTCTACCT CGGCCAGACC CTCGTGCTGC TTTTGCTGCT CGGACTGCTG CTCAACCGTC TCTACCACCG CCTGATCACC CGGCGCCTGG CGCGCATCGA CCGGGCGGCC CGGCGATTCG CCGCCGACCA CGACCAGCGG CCGCGGCCGG CGACGGTCGA GGGCCACGAC GAGATCGGCC AGTTGGCCGG AACCTTCAAC CGGATGATGA GCCAGTTGCA CGAGCGCCAG CAGGCCTTGC AGAACAGCGA GCGACTGATG CGCGAGCTGT TCGACAGCTC GCCGGTGGGC ATGCTGGTGG TCAGTTGCGG CCTGTGCATC GAGCAGGCCA ACCCGGCGGC GGCGGTGCTG TTCGGCTGCG CTCCGGCGGA CCTGCCGGGC AAGCGTCCGC GCGATCGCCT GCTGAAAGGC GAGTCGCTCC GGCGCCTGTT GCGCACCCCG GCCAACACAC CGGTCGAACT GACCGGCCTG TGCCAGGGGC GTGAACTGCC GCTGGAAGTC ACCTGGACGC CCTTCGTGCG CGACGGCAGC CGGCACTATC TGCTTCTGCT GCGCGACATC AGCGAACGCC TGCAGGCCGA GCAGCGCCTG CGTTTCCTCG CTCATTTCGA TCCGCTGACC CACCACCTGG CCAACCGCCA CTATCTGGTC CAGCGTCTTG AACAGTTGCT GGCTACGCGG ACGCCATTGA GCCTGCTGTT CCTCGACATC GACCACTTCA AGCGGATCAA CGACACCCTC GGCCACGAGG TCGGCGACCA CCTGCTGGTG GAAATCGCCC GGCGCCTGAC CCGCCTGGTC CCCGACCAGG TGCTGGTGGC CCGCTCCGGC GGCGACGAAT TCCTCCTGCT GCTGGCAAGG CGCGCGGCGG AGCAGGCCCG GGAGCTAGCC GAGACCCTGC TGCGCGACTT CAAGACGCCG CTGCAGGTCG GCCAGTACGA ATGCTTCCTC ACCCCCAGCA TCGGCATCGC CAACTGCGAC GGTCAGGGCG ACGCCACCGA TCTGCTCAAG CAGGCGGACC TGGCCCTCTA CGCCGCCAAG GACGCCGGCC GCAACCGCCT GGCCGTCTAC AGCCACCCGC TCGGCGAGGC CGCCGAGCAC CGCCTGCAAC TGGAGCACGA GCTGCGCCGC GCCCTGGACC TGCGGGAGTT CACCCTGCAC TACCAGGCCC AGGTCGACGA CCAGGGCCGT CCGCAGGTCA TGGAGGCCCT GCTGCGCTGG CACTCGCCGA CCCGCGGACT GGTGCTGCCC GGCGAATTCA TCCCGGTGCT GGAAGAAAGC GGCATGATCA TCGAAGCCAC CCGCTGGGTG TTCCGCGAGG CCTGCCGCCA GGCGCGCCGC TGGGCCGGAC AGGGCCATGC GCTGCGCATC GCGGTCAACC TGTCGCCGCT GGATTTCCGC CAGGCCGACC TGGCCGGCAG CCTGCTGGCC ATCCTCGAAG AGGAACGGCC CCCGACCGGC TCGCTCGAAC TGGAAATCAC CGAGACCGCC CTGCTCGATG CCGGCGACGA CGTCCAGCAG ACCCTGGCCC GCCTCAAGGC CGCCGGCATG CCGCTGCTGC TGGACGATTT CGGCACCGGC CACGCCTCGC TGGCCTACCT GCAGCAGTTT CCCTTCGACG GCATCAAGAT CGACCGCCAG TTCGTCGCCG GCCTCCCGGA AAGCGAGCAC TCGGTGGCCC TGGTGCGCGG CATCCTGACC ATGGCCCGAC ATCTCGGCCT GCACGTGGTG GCCGAAGGGG TGAGCAACGA GCGCCAGGCC GCCTTCCTGC GCCTCAACGG CTGCCCCAGC CTGCAGGGCT ACCACTACTG CCGCCCGCAG CCGGCCGAAG ACCTCGAGCG CATCTGGATA CGGGAATCGT CGTCCAGCCT GCAGCCCTGG GGACACTGA
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Protein sequence | MLSRLARLSL RKSLPLLLGL FAVVFTLLLT TLYLPRAIDR ELHAWRSHTD QLLALLQNTL SDHLRHGRLA ELETALSEFA GLQGIRWAMV TDPQLQVLAT TRLGLVPRHL GVAAEQLKAL MASGRPAWLE HAGRRYLAIL PLDRKLQGNT GNGETLLVDL DFNPLLDRTR FEAWLYLGQT LVLLLLLGLL LNRLYHRLIT RRLARIDRAA RRFAADHDQR PRPATVEGHD EIGQLAGTFN RMMSQLHERQ QALQNSERLM RELFDSSPVG MLVVSCGLCI EQANPAAAVL FGCAPADLPG KRPRDRLLKG ESLRRLLRTP ANTPVELTGL CQGRELPLEV TWTPFVRDGS RHYLLLLRDI SERLQAEQRL RFLAHFDPLT HHLANRHYLV QRLEQLLATR TPLSLLFLDI DHFKRINDTL GHEVGDHLLV EIARRLTRLV PDQVLVARSG GDEFLLLLAR RAAEQARELA ETLLRDFKTP LQVGQYECFL TPSIGIANCD GQGDATDLLK QADLALYAAK DAGRNRLAVY SHPLGEAAEH RLQLEHELRR ALDLREFTLH YQAQVDDQGR PQVMEALLRW HSPTRGLVLP GEFIPVLEES GMIIEATRWV FREACRQARR WAGQGHALRI AVNLSPLDFR QADLAGSLLA ILEEERPPTG SLELEITETA LLDAGDDVQQ TLARLKAAGM PLLLDDFGTG HASLAYLQQF PFDGIKIDRQ FVAGLPESEH SVALVRGILT MARHLGLHVV AEGVSNERQA AFLRLNGCPS LQGYHYCRPQ PAEDLERIWI RESSSSLQPW GH
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