| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_07540 |
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| Symbol | hfq |
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| ID | 7759706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 713089 |
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| End bp | 713343 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643803671 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_002797975 |
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| Protein GI | 226942902 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG GGCATTCGCT ACAAGACCCT TACCTTAATA CCCTGCGTAA AGAGCGCGTT
CCGGTTTCCA TCTATCTGGT CAATGGCATC AAGCTGCAGG GCCAGATCGA GTCCTTCGAC
CAGTTCGTGA TTCTGCTGAA GAACACTGTC AGCCAGATGG TCTACAAGCA CGCGATTTCC
ACCGTGGTGC CGAGCCGTCC CGTGCGTCTG CCCACCGCGA GCGAGGGCGA GCAGCCCGAA
CCCGGCAACG CCTGA
|
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| Protein sequence | MSKGHSLQDP YLNTLRKERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS
TVVPSRPVRL PTASEGEQPE PGNA
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