Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_07070 |
Symbol | |
ID | 7759660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 670940 |
End bp | 672301 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643803628 |
Product | Multidrug efflux protein, MatE family |
Protein accession | YP_002797932 |
Protein GI | 226942859 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.12454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGTCC TGGCCGAGGC CTGGCGCCAT GCGCCGACCC AGCGCCGGGT CTGGGCGCTG GCCGCGCCGA TGATCCTCTC CAACCTCTGC GAGCCCCTGG TGACGCTGGT CGACAGCGCG GTGATCGGCC ACCTGCCGCA CGCCCACCAG CTCGGCGCGG TGGCGGTCGG CGGCAGTCTG TTCACCCTGC TCGCCTGGGC CTTCGGTTTC CTGCGCATGG GCACCACCGG TTTCGCCGCC CAGGCCTGCG GCCGCGCCGA CGGCGACGCG CTGCGCCGGG TGCTGCTGCA GAGCCTGCTG CTCGGGCTGG CCCTCGCCCT GCTGCTGGGC CTCCTGGCGT TGCCCTTCGG CGCGTTCGCC CTCGGCCTGA TGCAGCCCTC GGCGGCGCTC GACGCGCTGG CCCGCGAATA CTTCCATACC CGCCTGCTCG GCCTGCCGGC GGTGCTGGCC GGCTACGCCC TGATCGGCTG GCTGCTCGGC ACGCAGAACG CCCGCGCGCC GCTGGCCATG CTGCTGGCCA CCAGCCTGGG CAACGTGGTC CTCGACCTGT GGTTCGTCCT CGGCCTCGAC TGGGGCGTGG CCGGCGCCGC CCGCGCCTCG GTGATCGCCG AGTGGAGCGG TACCCTGCTC GGTCTGGCGC TGGCCCGCCG GGCGCTGCGC CGGTATCCCG GCCGGCTGCC CTGGGACGCC CTGCGCCGCT GGACGAACTG GCGCCCGTTG CTGGCGGTGA ACCGCGACAT CTTCCTGCGC AGCCTGCTCC TGCAACTGGT GTTCTTCCTG ATCACCGTGC AGGGCGCCCG GCTCGGCGAC GCCACGGTGG CGGCCAACGC CCTGCTGCTC AACGGCCTGC TGCTCACCGC CCACGCCCTG GACGGCCTGG CCCACGCCGT CGAGGCGCTG TGCGGGCATG CCATCGGCAG CCGCGACCGC ACCGCCCTGC AGCGTTCGCT GGCGGTCGCC GGACTCTGGT CGCTGCTGGC CAGCCTGGGC TTCGCGCTGT TCTTCCTGGC CGGCGGCGGG TTGTTCGTCG GCCTGCAGAC CGACATCCCG GCGGTGCGCG AACTGGCCAT GGAGTACCTG CCCTACCTCG CCGTGCTGCC GCTGATCGCG GTGTGGAGCT ACCTGCTCGA CGGCCTGTTC ATCGGCGCCA CCCGCGCCCG CGAGATGCGC GACGCCATGC TGATCGCCGT GGCCCTGGCG CTGCCGCTCG CCTGGCTGCT GCGCGGACTC GGCAACCATG GCCTGTGGCT GGCCTTCCTC GCCTTCATGG CGCTGCGCGC CCTGAGCATG GCGGCCTTCG CCCGGCGCCT GTGGCGCCAG GGACTGGCGG ATCAGGCACC AGCGGCACAG GCCGCTGGCT AG
|
Protein sequence | MSVLAEAWRH APTQRRVWAL AAPMILSNLC EPLVTLVDSA VIGHLPHAHQ LGAVAVGGSL FTLLAWAFGF LRMGTTGFAA QACGRADGDA LRRVLLQSLL LGLALALLLG LLALPFGAFA LGLMQPSAAL DALAREYFHT RLLGLPAVLA GYALIGWLLG TQNARAPLAM LLATSLGNVV LDLWFVLGLD WGVAGAARAS VIAEWSGTLL GLALARRALR RYPGRLPWDA LRRWTNWRPL LAVNRDIFLR SLLLQLVFFL ITVQGARLGD ATVAANALLL NGLLLTAHAL DGLAHAVEAL CGHAIGSRDR TALQRSLAVA GLWSLLASLG FALFFLAGGG LFVGLQTDIP AVRELAMEYL PYLAVLPLIA VWSYLLDGLF IGATRAREMR DAMLIAVALA LPLAWLLRGL GNHGLWLAFL AFMALRALSM AAFARRLWRQ GLADQAPAAQ AAG
|
| |