| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06870 |
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| Symbol | retS |
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| ID | 7759640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 650050 |
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| End bp | 652851 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643803608 |
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| Product | hybrid histidine protein kinase RetS |
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| Protein accession | YP_002797912 |
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| Protein GI | 226942839 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.577631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCGGC CTTGGAATGC CACAACGCTC ATCGTCAGTC TGCTGCTGGT CGTACTCGCG
GCCTTGCCGA CCCTGGCAGG CAGCCTGCTG CGCTCGGACG AACAGTTCGG CCCGCTCGGC
CCAGGCGCAC CGAACGGCGA CTGGCGAATC CTTCTCGACG AATCGGCCAG CCTCACCCTG
AAGGATGTCA TCGAGCGGCG CGACCATTTC GCCCCGCTCG GCCACCGCTC CCTCACCCTG
CCGGCCAACC AGGCCGCCTG GCTGCGCGTG TCCATCGCCG GGCACGACAC CCCGCGCTGG
ATCTGGGTGT TCGCTCCGCG CGTGGACCGG GTCGACTTCT TCCTGACCAA CAGGGGCGCG
ACGGAGCGCC GGATCGAGAC CGGAGCCATG CTCCCGGACG GCCTCTCCAC GTCCGGGCAG
GCCCACCTGT TCGACCTGCC GACGGACCAG ACAACGCGCG AGGTCTGGCT GCGACTGGCT
CCCCGGCAAG CCGCGCCGGC CTGGTTCGAC TACGTGGATA CCGCCGGACT GCTGGACAAG
AACAAGCTGG CCTATACCCT CGGCGCCCTG CTCAGCGCCC TCGCCCTCGG GATGATCTAC
CACCTGGTCC GTTTCGGCTA CAACAGGGTG CTCTGCAATC TCTGGCTGTC GGCCATGCAG
GGCACGCTCC TGCTCAGCGC CATCGCGCAT TTCGGCCTGC TCGGCGCCTG GTTGCCGCAA
CTCGGGCATT ACCAGATCCG GGTGGCGGAT ATCACCGCCC TCCTCAGCTT CCTCTTCCTG
CTGCAGTTCA CTCGCAGCTT CTTCGACCAG GAGGAGTCCC CGCGCCTGCT CGACTGGCTG
CTGCGCGGCG AGATCGCCGT GCTGGCACTG GCCGCCGTGC TCGACGGCGC CTCGCCCCAC
GACATGCTGC GCAGCGGGCT GATCCTGCTC GCCAGCCTGA GCGCGACGGG CTGCGCCCTC
TACCACTGGC TGCACGGCTA TCGCCCGGCA CGCCTGGCGC TGGTCGGGAC GCTGCTCTTC
CACCTGGGTT TCAGCGCCTA TCTGTCGATG CTGCTGGATT TCGGCCAGTT CGGCCCCTGC
TGGCAGATCT TCGCGCTCTT CGCCTTCACC GCCGCCAGCG GCCTGCTGCT CGTCTTCGCC
CTGGCCGAGC GGCAGTGCAA GATCGAGCGG GACCGCGCCG CCTGGCGCAC CAGCGAAGCG
GCGAGCAGCG CCGAATTGCG CGCCAAGAGC GAATTCCTGG CCAAGCTCAG CCATGAGATC
CGCACCCCGA TGAACGGCGT CCTGGGCATG ACCGAACTGC TGCTCGGCAC GCCGCTGACC
GCCAAGCAAT ACGACTACGT GCAGACGATC AACAGCTCGG GCAACGAGCT GCTCAGCCTG
ATCAACGACA TTCTCGACAT CTCCCGCCTG GAATCCGGCC AGATCGAACT GGACGACGTG
CAGTTCGACC TCAATGGCCT GATCGAGGAC TGCCTGGGCA TCTTCCGCGC CAAGGCGGAA
AGGCGCCATG TCGAGCTGAT CAGCTTCATC CAGCCGCAGG TGCCGCGGGT GATCAACGGC
GACCCGACGC GGCTGCGCCA GATCCTGCTG ACCCTGATCG AGAACGCCTT CCGGCAGACC
GACGAAGGCG AAATCCTGCT CAAGGTGTCG CTGGAAACCG AGGGTCCCCG GCCGAACCTG
CACGTCGCCG TGCAGGACAG CGGGGAACCG ATGCCGGAGT CCAGACGCGA AGCGATGCTG
AACAGCCGCG TGCAGAGCAG CGACCTGCTC TCCGCCGCGC AGATCGACGG CAGCCTCGAC
CTGATCATCG CCCGTCAACT GATCACCCTG ATGCACGGTA TCTGCGGCAT CGATGCCGAT
CCGACCCGCG GCACCACGCT CTGGCTGTCG CTGCCCCTCG ACCCGGCCCG CCTGGAGCAT
CCGGTCGCCG ACCTGGACAG CCCGCTGCAG GACGCCCGCC TGCTGGTGGT GGACGACAAC
GACACCTGCC GCAAGGTCCT GCTGCAGCAG TGCGGGGCCT GGGGCATGAA GGTCAGTGCG
GTCTCCTCCG GCAAGGAGGC CCTGGCCCTG CTGCGCACCA AGGCCGATCT GGGGGAATAC
TTCGACGCGG CGCTGCTCGA CCAGAACATG CCCGGCATGA GCGGCCTGCA ACTGGCCCAG
CGGATCAAGG AAGACCCCGG CCTGAATCAC GACATCCTGC TGGTCATGCT GACCGGCCTC
AGCGATGCGC CGGGACGGGT CTACGCGCGC AACGCCGGCA TCACCTGCAG CCTGGCCAAG
CCGGTGGCCG GCTACACGCT GAAGACCACC CTCGCCGAGG AACTCGGCAA GCGCCGCGCG
GCCCGGCCGG CCGCCAGCGG CCTGGAGGAG AACGCCCCCC TGGAAGTGCC GAGCGACTTC
CGCATCCTGG TCGCCGAGGA CAACAGCATC TCCACCAAGG TCATCCGCGG CATGCTGCGC
AAGCTCAACC TGCAACCGGA TACCGCCAGC AACGGCGAGG AGGCCCTGCA GGCGATGAAG
GCCAAGCAGT ACGACCTGGT GCTCATGGAC TGCGAGATGC CGGTGCTCGA CGGCTTCGCC
GCCACCGAGC AGTTGCGCGC CTGGGAAGCC AGCGAACTCC GTCCGCACAC GCCGATCGTC
GCGCTCACCG CGCATATCCT CAGCGAGCAC CGCGAGCATG CCCAGCGGGT CGGCATGGAC
GGCCACCTCG CCAAGCCGGT GGAGTTGTCG CAACTGCGCG CCCTGATCGA ACACTGGGTC
GAGCGCAAGG AGGAGTCCTA CCGCCACGCG CTTCATCCCT GA
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| Protein sequence | MRRPWNATTL IVSLLLVVLA ALPTLAGSLL RSDEQFGPLG PGAPNGDWRI LLDESASLTL
KDVIERRDHF APLGHRSLTL PANQAAWLRV SIAGHDTPRW IWVFAPRVDR VDFFLTNRGA
TERRIETGAM LPDGLSTSGQ AHLFDLPTDQ TTREVWLRLA PRQAAPAWFD YVDTAGLLDK
NKLAYTLGAL LSALALGMIY HLVRFGYNRV LCNLWLSAMQ GTLLLSAIAH FGLLGAWLPQ
LGHYQIRVAD ITALLSFLFL LQFTRSFFDQ EESPRLLDWL LRGEIAVLAL AAVLDGASPH
DMLRSGLILL ASLSATGCAL YHWLHGYRPA RLALVGTLLF HLGFSAYLSM LLDFGQFGPC
WQIFALFAFT AASGLLLVFA LAERQCKIER DRAAWRTSEA ASSAELRAKS EFLAKLSHEI
RTPMNGVLGM TELLLGTPLT AKQYDYVQTI NSSGNELLSL INDILDISRL ESGQIELDDV
QFDLNGLIED CLGIFRAKAE RRHVELISFI QPQVPRVING DPTRLRQILL TLIENAFRQT
DEGEILLKVS LETEGPRPNL HVAVQDSGEP MPESRREAML NSRVQSSDLL SAAQIDGSLD
LIIARQLITL MHGICGIDAD PTRGTTLWLS LPLDPARLEH PVADLDSPLQ DARLLVVDDN
DTCRKVLLQQ CGAWGMKVSA VSSGKEALAL LRTKADLGEY FDAALLDQNM PGMSGLQLAQ
RIKEDPGLNH DILLVMLTGL SDAPGRVYAR NAGITCSLAK PVAGYTLKTT LAEELGKRRA
ARPAASGLEE NAPLEVPSDF RILVAEDNSI STKVIRGMLR KLNLQPDTAS NGEEALQAMK
AKQYDLVLMD CEMPVLDGFA ATEQLRAWEA SELRPHTPIV ALTAHILSEH REHAQRVGMD
GHLAKPVELS QLRALIEHWV ERKEESYRHA LHP
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