Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_06810 |
Symbol | |
ID | 7759635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 645919 |
End bp | 646767 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643803603 |
Product | Periplasmic binding protein |
Protein accession | YP_002797907 |
Protein GI | 226942834 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.251258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCA CCACCGGCCC GGATCGGCGC GCCGGGGCTC CGGCAGTTGG CCTGAGGCAT CTCTGCGCCG TCCTGCTGCT GTGTTTCGCC CTGCCGCTGG CCGCTGCCGA ACGGGTGGTC AGTCTGGCGC CATCGCTCAC CGAATCGATG CTGGAACTGC AGGCCGGCGA CCGTCTGGTC GGTGTGCTCG ATGGCGGCGA GCGGCCGGCG GCGCTGGCCG GCCTGCCGTC GCTGGGACGC TGGGGCCGGC TGGAAATGGA AACCTTGCTC GCCCTGCGCC CGGACCTGAT CCTGCTCTGG CCGGACAGCA TAAGCGCGGC GCAGCGCGAG CAGTTGCGTG GCTTCGGTAT CCCCGTGTTC GAGGCGCAGC CCCGGCGCCT GGAAGACATC GCCACGCAGC TCGAAGCGCT CGGCGAGCGG GTCGGGCGTG CCGAGCGGGG ACGCGAATTG GCCGCGCAGT TGCGCCGGCA ACTCGACGAG CTGCGTCGCC ACTACCGTCG CGAAGCGCCG CTGCGGGTCT TCTACCAGGT CTGGGACCGC CCGCTGTACA GCATCGGCGG CCCGCAGATC ATCAGCGATG CCCTGCGGGT CTGCGGCGCG GTGAACCTCT TCGCCGACCT CGACCTGCCG GCGCCGCAGC TCTCCGTCGA GGCGGTGCTG GCGCGCGATC CCGAGGTGAT CCTGGTCAGC CAGCCGGAGC AGCGCGATGC CTGGCAGGCC TGGCCGCAAC TGCAGGCCGT GCGGCGCGGA CAGGTCTGGG CCGTGCCCGA CCTCGGCCTC GAGCGGCCCA GCCCGCAGAT GCTGGCGGCT ACCCGCAAGC TGTGCGAGCT GCTGCATCGG GTCCCCTAG
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Protein sequence | MARTTGPDRR AGAPAVGLRH LCAVLLLCFA LPLAAAERVV SLAPSLTESM LELQAGDRLV GVLDGGERPA ALAGLPSLGR WGRLEMETLL ALRPDLILLW PDSISAAQRE QLRGFGIPVF EAQPRRLEDI ATQLEALGER VGRAERGREL AAQLRRQLDE LRRHYRREAP LRVFYQVWDR PLYSIGGPQI ISDALRVCGA VNLFADLDLP APQLSVEAVL ARDPEVILVS QPEQRDAWQA WPQLQAVRRG QVWAVPDLGL ERPSPQMLAA TRKLCELLHR VP
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