Gene Avin_06800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06800 
SymbolribA 
ID7759634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp645291 
End bp645917 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID643803602 
ProductGTP cyclohydrolase II 
Protein accessionYP_002797906 
Protein GI226942833 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.447222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGTCG TCTTCGTCGC CGCATCCAAG CTGCCCACGC CGTTCGGCGT CTTCACCATG 
CATGGCTTTC TCGACGAAGC CACCGGCAAG GAGCATGTGG CGCTCACCCT GGGCACGGTG 
GACGATGGCG CGCCGGTGCT CGGCCGCCTG CATTCCGAGT GCCTGACCGG TGATGCGCTG 
TTCAGCCTGC GCTGCGACTG CGGCTTTCAA CTGGAAGCCG CACTGCGCGC CATCGCCGCC 
GAGGGCCGTG GCGTGCTGCT CTACCTGCGC CAGGAGGGGC GCGGCATCGG CCTGCTCAAC 
AAGATCCGCG CCTACAAGCT GCAGGACGCC GGCGCCGATA CCGTCGAGGC CAACGAGCGC 
CTGGGTTTTC GCGCCGACCA GCGCGACTAC GGGATCTGCA AACCGATGCT CGAGCATCTG 
GGCATCACCG CGATCAAGCT GATGACCAAC AATCCGCGCA AGGTCAAGGC GCTGGAGGGG 
GCCGGCATCC AGGTGACCGA ACGGGTACCG CTGCAGACCG GGCTCAACCC CCACAACCAG 
AAATACCTGG CGACCAAGGC CGGCAAGCTC GGTCACCTGC TCGGCAGCCT GCATCAGGGC 
GAGGTGGAAA CGCCGACCGG GAGCTGA
 
Protein sequence
MSVVFVAASK LPTPFGVFTM HGFLDEATGK EHVALTLGTV DDGAPVLGRL HSECLTGDAL 
FSLRCDCGFQ LEAALRAIAA EGRGVLLYLR QEGRGIGLLN KIRAYKLQDA GADTVEANER 
LGFRADQRDY GICKPMLEHL GITAIKLMTN NPRKVKALEG AGIQVTERVP LQTGLNPHNQ 
KYLATKAGKL GHLLGSLHQG EVETPTGS