Gene Avin_06540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06540 
Symbol 
ID7759608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp625112 
End bp625615 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID643803576 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_002797880 
Protein GI226942807 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0610132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTG GGGTTAACAA AGTCATTCTG ATCGGCAACG TCGGCGGCGA TCCGGAAACC 
CGGTACCTGC CCAACGGCAA CGCGGTCACC AACATCACCC TGGCCACCAC CGACAGTTGG 
AAGGACAAGC AGACCGGCCA GCAGCAGGAG CGTACCGAAT GGCATCGCGT GGTGTTCTTC 
GGCCGGCTCG CCGAGATCGC CGGCGAGTAC CTGCGCAAGG GCTCGCAGTG CTACGTCGAG 
GGCCGCCTGC AGACCCGCAA GTGGCAGGGG CAGGATGGCC AGGATCGCTA TACCACAGAG 
ATCGTCGTCG ACATGAACGG CACCTTGCAA CTGCTCGGCG GCCGCGCCGG CAACCCCGAC 
GACGCACCGC GCGCGCCGCG TCCCCCGCGC GAGCCGCAGC AGCAGGCCCA GGCTCCGCAG 
TCGCGCCCCG CTCCCGCTCC GCAGCAGGAC CGGCAGCCGC CAGCGCCGGA CTACGACAGC 
TTCGACGACG ACATTCCGTT CTGA
 
Protein sequence
MARGVNKVIL IGNVGGDPET RYLPNGNAVT NITLATTDSW KDKQTGQQQE RTEWHRVVFF 
GRLAEIAGEY LRKGSQCYVE GRLQTRKWQG QDGQDRYTTE IVVDMNGTLQ LLGGRAGNPD 
DAPRAPRPPR EPQQQAQAPQ SRPAPAPQQD RQPPAPDYDS FDDDIPF