| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06310 |
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| Symbol | rpsC |
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| ID | 7759585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 610236 |
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| End bp | 610922 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643803553 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_002797857 |
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| Protein GI | 226942784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.91278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC CGTAGGCATT CGCCTGGGAA TCGTCAAGGA GCACACCTCG
GTTTGGTATG CCGACCGCAA GAATTACGCG GACTATTTGT ATGCCGACCT GAAGGTGCGT
GAGTATCTCC AAGACAAACT AAAAAGCGCG TCCGTGAGCC GCATCGATAT CGCTCGTCCG
GCTCAAACCG CACGCATCAC CATCCACACC GCGCGTCCCG GTATCGTGAT CGGCAAGAAG
GGTGAGGATG TCGAGAAGCT GCGTCAGGAC CTGACCAAGC AAATGGGTGT GCCGGTGCAC
ATCAACATCG AAGAGATCCG CAAGCCGGAA CTCGACAGTA TGCTGGTTGC TCAGAGCGTG
GCCCAGCAGC TTGAGCGTCG CGTGATGTTC CGTCGCGCCA TGAAGCGTGC GGTACAGAAC
GCCATGCGCA TTGGTGCCAA GGGCATCAAG ATCCAGGTGA GTGGTCGTCT GGGCGGTGCC
GAAATCGCCC GTACCGAATG GTACCGCGAA GGCCGTGTGC CGCTGCACAC CCTGCGCGCG
GATATCGATT ACGCCACCTA CGAAGCGCAC ACCACCTACG GTGTGATCGG CGTCAAGGTT
TGGATCTTCA AGGGCGAGGT CATCGGTGGC CAGCACGAAG AGCTCAAGCC GCAAGCGCCT
GCGCCTCGCA AAAAAGCTGC TAAGTAA
|
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| Protein sequence | MGQKVHPVGI RLGIVKEHTS VWYADRKNYA DYLYADLKVR EYLQDKLKSA SVSRIDIARP
AQTARITIHT ARPGIVIGKK GEDVEKLRQD LTKQMGVPVH INIEEIRKPE LDSMLVAQSV
AQQLERRVMF RRAMKRAVQN AMRIGAKGIK IQVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYATYEAH TTYGVIGVKV WIFKGEVIGG QHEELKPQAP APRKKAAK
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