| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06190 |
|---|
| Symbol | rpsL |
|---|
| ID | 7759573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 602359 |
|---|
| End bp | 602730 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643803541 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_002797845 |
|---|
| Protein GI | 226942772 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.529309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA TCAACCAGCT GGTGCGCCAG CCGCGCAAGC GCCTCGTCGA GAAAAGCGAC
GTGCCTGCGC TGCAGAACTG CCCCCAGCGC CGTGGTGTGT GCACCCGTGT GTACACCACC
ACGCCGAAGA AACCGAACTC CGCACTGCGT AAGGTGTGCC GTGTTCGTCT GACCAATGGC
TACGAAGTCA CTTCCTATAT CGGCGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTCGTG
CTGATCCGCG GTGGTCGCGT CAAGGACCTT CCGGGTGTGC GCTATCACAC CGTGCGCGGC
TCGCTGGATA CCTCCGGCGT GAAAGACCGC AAGCAGGGCC GTTCCAAGTA CGGCGCCAAG
CGTCCCAAGT AA
|
|---|
| Protein sequence | MATINQLVRQ PRKRLVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
YEVTSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKDR KQGRSKYGAK
RPK
|
|---|
| |