Gene Avin_05950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05950 
Symbol 
ID7759551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp576663 
End bp577559 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID643803515 
Producthypothetical protein, RarD family 
Protein accessionYP_002797823 
Protein GI226942750 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000220659 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCCG CCAACCCGCG CCGCGGGTAT CTCCTGGGCC TCACCGCCTA CGGGCTCTGG 
GGTCTGTTCC CGCTCTACTT CAAGATCCTG GAAAACATCC CCGCCGGGGA AATCCTAGTC
CATCGGGTGC TCTGGTCGGC CCTCTGCGGG CTGCTCCTGC TGCAGCTCTG GCGGCATCCG
GGCTGGTGGC GGGAGCTGCG CGACAATCCC CGGCTCCTCG CCGTGCTCGC CGGCAGCGGC
CTGCTGATCG CCTGCAACTG GCTGCTCTAC GTCTGGGCGG TGAACAACGG ACGCATGCTG
GAGACCAGCC TGGGCTACTA CATCAACCCG CTGGTCAACG TCCTGCTCGG CCTGCTGCTG
CTCGGCGAAC GCCTGCGCCC GCTGCAATGG CTGGCGGTGG GCCTGGCGGC CCTCGGCGTG
CTACAGCAAC TCTGGCAGCT CGGCAGCCTG CCGTGGATCT CGCTGGCGCT GGCGCTCTCC
TTCGGCTTCT ACGGACTGAT CCGCAAGCGG GCGCCGGTCG CCGCGCTGCC TGGCCTGGTG
GTGGAGACCT GGCTGCTGCT GCCGCCAGCC CTCGGCTGGC TATGGCTGCA TCCGGACGCC
GGCAGCGCCC AGGGCGCCTT CTGGAGCACA CCGCAGGCGC TCTGGCTGGC CATGGCCGGC
CCGGTCACCC TGGTGCCGCT GCTCTGCTTC AATGCCGCCG CGCGGCATCT GCCCTATGCA
ACCCTCGGCT TCCTGCAATA CCTGGCGCCG ACCCTGGTGC TGCTGCTCGC GGTATTCGTC
TACGGCGAGC CGCTGGAGCC GGGCAAGCTG GCGGCCTTCG TCTGCATCTG GCTGGGCCTG
GCGGTCTACA GCCTGGACAT CTGGCGCCAC CTGCAACGAC CGCCCGCCAC GCCATGA
 
Protein sequence
MHAANPRRGY LLGLTAYGLW GLFPLYFKIL ENIPAGEILV HRVLWSALCG LLLLQLWRHP 
GWWRELRDNP RLLAVLAGSG LLIACNWLLY VWAVNNGRML ETSLGYYINP LVNVLLGLLL
LGERLRPLQW LAVGLAALGV LQQLWQLGSL PWISLALALS FGFYGLIRKR APVAALPGLV
VETWLLLPPA LGWLWLHPDA GSAQGAFWST PQALWLAMAG PVTLVPLLCF NAAARHLPYA
TLGFLQYLAP TLVLLLAVFV YGEPLEPGKL AAFVCIWLGL AVYSLDIWRH LQRPPATP