Gene Avin_04600 details

Gene Information

• Locus tag: Avin_04600
• Symbol: hisH
• ID: 7759418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 435786
• End bp: 436424
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643803382
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_002797690
• Protein GI: 226942617
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACGG TAGCCGTGAT CGACTATGGC ATGGGCAACC TGCACTCGGT GGCCAAGGCG 
CTGGAGCACG TCGGCGCCGG CAGGGTGCTG ATCACCAGCG ACGCCCAAGT GATCCGCGAG 
GCCGACCGGG TGGTGTTTCC CGGTGTCGGC GCGATCCGCG ACTGCATGGC CGAGATCCGT 
CGCCTGGGCT TCGACGCCCT GGTCCGCGAG GTGAGCGCCG ACCGGCCGTT CCTCGGCATC 
TGCGTCGGCA TGCAGGCGTT GCTGGAGCAC AGCGAGGAGA ACGGCGGGGT CGACTGCATC 
GGCCTGTTCC CCGGCCGGGT GCGCTTCTTC GGCAAGGACC TGGTCGAGGG CGGCGAGCAC 
CTCAAGGTGC CGCACATGGG CTGGAACGAG GTCGCGCAGA GCGTCGACCA TCCGCTCTGG 
CACAACATCC CGGACCGTGG CCGCTTCTAT TTCGTGCACA GCTACTACAT CGAGGCCGGC 
AATCCGCGCC AGGTGGTCGG TCGCGGCCAC TACGGGGTCG ACTTCGCCGC CGCGCTGGCC 
GAGGGCTCGC GCTTCGCCGT GCAGTTCCAC CCGGAAAAGA GCCACACCCA CGGCCTGCAA 
CTGCTGCAGA ACTTCGCCGC CTGGGACGGG CGCTGGTAG 

 

Protein sequence

MQTVAVIDYG MGNLHSVAKA LEHVGAGRVL ITSDAQVIRE ADRVVFPGVG AIRDCMAEIR 
RLGFDALVRE VSADRPFLGI CVGMQALLEH SEENGGVDCI GLFPGRVRFF GKDLVEGGEH 
LKVPHMGWNE VAQSVDHPLW HNIPDRGRFY FVHSYYIEAG NPRQVVGRGH YGVDFAAALA 
EGSRFAVQFH PEKSHTHGLQ LLQNFAAWDG RW