Gene Avin_01970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_01970 
Symbol 
ID7759158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp191658 
End bp192434 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID643803122 
ProductN-acetylmuramoyl-L-alanine amidase protein 
Protein accessionYP_002797433 
Protein GI226942360 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0442521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGC TTGCCCTTCC CCTGATCCTC GCCTTGCTGG CCGGCTGCGC CGTCGGCCCA 
CGGATCGACA CCCGCTACAG CTCGCGCGGC CAGGACAGCC GCGTCCAGTA CATCGTTCTG
CACTACACCT CGGAAGATCT GCCGGGCTCG CTGCGCCAGC TCACCCGGGG CGAGGTCAGC
AGCCACTATC TGATCGATGC CAAGCCCGCG ACCATCTACC GCCTGGTCGA GGAGAACCGC
CGTGCCTGGC ATGCCGGAAA CAGCCAGTGG CGCGGCAGAA CCTGGCTGAA CGCCAGCAGC
ATCGGCATCG AGCTGGTCAA TCCCGGCTAT CTGGACACGC CCAACGGGCG TCTTTGGTAT
CCCTATCCGG CGAAGCAGAT CGATGCGCTG ATCGTTCTCC TCAAGGACAT CGTCAAGCGT
CACGGGCTGG GACTGGAGGC GATAGTCGGC CACAGCGATA TCGCCCCGCT GCGCAAGGTC
GATCCGGGAC CTCTGTTTCC GTGGAAGCGC CTGGCCGAGG CCGGACTCAT CGTCTGGCCG
GATGCGCGCC GGGTAGCCGA GCTGCAGACG CGCTACGCCG TTCGCCTGCC GGATGTCGCC
TGGTTCCAGG AACAGTTGGC CCGACACGGC TATGCCCTGG AACGGCATGG CGTGCTCGAT
GCCGCGACGC GACGGGTCAT TGCCGCCTTC CAGATGAAAT ACCGTCCGGC CCGCTTCGAT
GGCGAGCCGG ACGCCGAAAC CGCGGCCCTG CTGGCCACCC TGAACGAAAC GAGGTGA
 
Protein sequence
MKSLALPLIL ALLAGCAVGP RIDTRYSSRG QDSRVQYIVL HYTSEDLPGS LRQLTRGEVS 
SHYLIDAKPA TIYRLVEENR RAWHAGNSQW RGRTWLNASS IGIELVNPGY LDTPNGRLWY
PYPAKQIDAL IVLLKDIVKR HGLGLEAIVG HSDIAPLRKV DPGPLFPWKR LAEAGLIVWP
DARRVAELQT RYAVRLPDVA WFQEQLARHG YALERHGVLD AATRRVIAAF QMKYRPARFD
GEPDAETAAL LATLNETR