| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_01880 |
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| Symbol | |
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| ID | 7764086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 182869 |
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| End bp | 184020 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643803113 |
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| Product | Secretion protein HlyD |
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| Protein accession | YP_002797424 |
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| Protein GI | 226942351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGAGG TTCCTCGGAT GCCAAAGAGG CGAGCCCCTG TTGCTGCAGT GGCTGCCATC
ATTTTGGCGG CGCTGCTGTC GAACGGCTGC AAGCGGGAGT CGCCAGCACC ACACCAGGTG
CTTGAGGTGG GCGTCGTCAC GCTTGAGCCG CAACCATATG TGCTGACTCA TGAGTTGCCG
GGCCGTGCGG CTGCCTATCG GATTGCGGAA GTACGTCCTC AAGTCAACGG TATCATCCAG
AAGCGTTTGT TTATCGAAGG CACTGAAGTG AGAGGTGGGC AGCAGCTGTA TCAAATCGAT
GCCTCAGTAT ACGAGGCTGC CTTGAAAGAG GCGGAGGCCA GTTTGGCTTC CGCCAAATCG
CTTGCGGAAC GCTATGCCGT ACTGATCAAG AGTCGCGCCG TGAGCCAACA GGCTTATGAG
GAGGCTCGAG CCGCCTATCT GCAGGCCGAA GCCGGCTTGG ACAAGGCTCG CATAGATCTT
CGCTATACCA GAGTATTAGC GCCTATCTCT GGTCGTATCG GGCGCTCTGC CGTAACCGAA
GGTGCGCTGG TCAGCAATGG CCAGGCTCAG GTAATGGCAA CCATTCATCA ACTCGACCCC
ATCTATGTGG ATGTCATTCA GCCGGCGCGT GAATTGCTGG CGTTACGCCG TGATCTGGCC
AGCGGTCGCT TGGAAAGAAC GGGAGAGAAT GCGGCCAAGG TGAGGCTGAT GTTGGAAGAT
GGCAGCGAAT ATGTCCATGA GGGACGATTG GAGTTTTCCG AAGTTGCCGT CGACGAGAGT
ACCGGTTCGG TAACCTTGCG AGCCGTGTTT CCGAATCCCG ACCGGGAGCT GCTGCCGGGG
ATGTTCGTCC ATGCTCGCCT GTTCCGTGGG ATGAAGAGCG AAGCGATTCT TGCGCCACAG
CAGGGCGTGA CACGCAATAC CAAAGGCGAA GCCATCGCCA TGGTGGTCAA TACAGAGAAC
AAAGTCGAGC TACGAACGCT CAAGGCAGAA CGTGCCGTCG GTAATCGCTG GCTGGTGAAC
GAAGGACTTC TACCGGGCGA CCGGTTGATC ACTGAAGGGC TACAGTTCAT TCAGCCGGGA
GTCGAGGTAA AGGCAGTGCC AGCCGGCAAT GTCAGGCAGG ACTCTGGGAC GTCCACGCAA
CCTTCAGGCT AG
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| Protein sequence | MREVPRMPKR RAPVAAVAAI ILAALLSNGC KRESPAPHQV LEVGVVTLEP QPYVLTHELP
GRAAAYRIAE VRPQVNGIIQ KRLFIEGTEV RGGQQLYQID ASVYEAALKE AEASLASAKS
LAERYAVLIK SRAVSQQAYE EARAAYLQAE AGLDKARIDL RYTRVLAPIS GRIGRSAVTE
GALVSNGQAQ VMATIHQLDP IYVDVIQPAR ELLALRRDLA SGRLERTGEN AAKVRLMLED
GSEYVHEGRL EFSEVAVDES TGSVTLRAVF PNPDRELLPG MFVHARLFRG MKSEAILAPQ
QGVTRNTKGE AIAMVVNTEN KVELRTLKAE RAVGNRWLVN EGLLPGDRLI TEGLQFIQPG
VEVKAVPAGN VRQDSGTSTQ PSG
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