Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_00600 |
Symbol | |
ID | 7759027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 61276 |
End bp | 63057 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643802986 |
Product | ABC transporter, ATP binding component |
Protein accession | YP_002797302 |
Protein GI | 226942229 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.248095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCCG ACGAGATCCT GGCCGTGGAC GCACGCGGGG TCGGCAAGCG CTTCGCCGAT CCCGCGACGC GGCGCCAGTT GGCCGCGCTC GACGACGTCG ACGTGCGGGT GGCGCATGGC GCGCTCACCG CGCTGGTCGG GCCGGACGGC GCCGGCAAGA CCACCTTCCT GCGGCTGGTC GCCGGGCTGA TGCGGCCGGA CCGAGGCGAA TTGTCGGTGC TAGGCCTGGA CGTGACGCGC CAGCCGCAGG CGGTGCAAGA CCGCATCAGC TACATGCCGC AACGCTTCGG CCTCTACGAG GACCTGAGCG TGCAGGAGAA CCTCGACCTG TACGCCGACC TGCATGCGCT GCCGCTGCCG GTGCGCCGCG AGCGTTTCGC CCGGTTGCTG GAGATGACCG ACCTCGAGCG CTTCACCAGA CGCCCGGCGG GCAAGCTGTC CGGCGGCATG AAGCAGAAGC TCGGCCTGGC CTGCACGCTG GTGCGCTCGC CGGAACTGTT GCTGCTGGAC GAGCCCACCG TCGGCGTCGA TCCGCTGTCG CGGCGCGAAC TGTGGGAGAT CGTGCAGCGC CTGGTGACGC AGGAACGCCT GTCGGTACTG CTGGCGACTT CCTACATGGA CGAGGCCGAG CGTTGCGCGC AGGTCCACGT GCTGCACGAA GGCCGTGTCC TGGCCAGCGG CAGTCCCGCC GAGATCGCCG CGCATGCCCG CGGCCTGTGC CACGACGCCG AGCCGCCGCC GGGACAGCCG CCGCGCCTGC TCCAGGCGCG GCTGCTCGAC GACGACGCGG CGATCGTCGA TGCGGTGCCG CATGGCGGGC GCGTGCACTT CATCCTGCGC GGCGCCACCG GCCCGGCCGA ACTCGGGCTG CCCGCGCGGA CGCTGCGGCC GGTGGCCGAG AAGCTGGAGG ATGGCTTCAT GGTGTTGCTG CGCGCGCGCA GCGGCGAGCG CCCGGCCGAG GCCGCCCGGG CCATGCCCGA AGGCTCGGGC GCCGCTGCGG CCGGGGAAGA CGCCCCGGTC ATCGAGGTGC GCGACCTGGT GCGCCGCTTC GGCGACTTCG TCGCGGTCGA CAAGACCAGC TTCAGCGTGC GGCGCGGCGA GATCTTCGGC CTGCTCGGCC CCAACGGCGC GGGCAAGACC ACCACCTTCC GCATGCTCTG CGGGCTGCTG CCGCCGAGCG GCGGCCAGGC GCGCGTCGCC GGGCTCGACC TGCGCAGCGC GCGCGCCCAG GCGCGCGGCC GCATCGGCTA CGTGTCGCAG AAGTTCGCCC TGTACGCGAA CCTGACGGTG GAGGAGAACC TGCGCTTTTT CGGCGGCGCC TACGGCCTGC GCGGCGCCGC GTTGCGCCAG CGCATGCAGG CGGTGCTCGC GCAGTTCGAC CTGCGCGGAC ACCAAGCGCA GCCGGCCGGG CAGTTGCCCG GCGGCGTCAA GCAGCGCCTG GCGATGGCGG TCGGACTGCT GCACGAGCCG GACATCCTGT TCCTCGACGA ACCGACCAGC GGCGCCGATC CGCTGGCGCG GCGCGGCTTC TGGCGGCGCA TCACCGCGCT GGCGAGCGCC GGCACCACCG TCGTGGTCAC CACGCACTTC ATGGAGGAAG CCGAATACTG CGACCGCATC GTCATCCAGG ACGCCGGCAG GCTGCTGGCG CTGGGCACGC CGGAGCAGGT ACGGCGACAG GCCGGCGAAA CCGCGCAGCG ACGCCTGGAC ATGGAGCAGG CCTTCATCGC CATCGTCGAA CGCGCACGTG CGGCGCGCGA TACGACGGAG CCGACGCCAT GA
|
Protein sequence | MSADEILAVD ARGVGKRFAD PATRRQLAAL DDVDVRVAHG ALTALVGPDG AGKTTFLRLV AGLMRPDRGE LSVLGLDVTR QPQAVQDRIS YMPQRFGLYE DLSVQENLDL YADLHALPLP VRRERFARLL EMTDLERFTR RPAGKLSGGM KQKLGLACTL VRSPELLLLD EPTVGVDPLS RRELWEIVQR LVTQERLSVL LATSYMDEAE RCAQVHVLHE GRVLASGSPA EIAAHARGLC HDAEPPPGQP PRLLQARLLD DDAAIVDAVP HGGRVHFILR GATGPAELGL PARTLRPVAE KLEDGFMVLL RARSGERPAE AARAMPEGSG AAAAGEDAPV IEVRDLVRRF GDFVAVDKTS FSVRRGEIFG LLGPNGAGKT TTFRMLCGLL PPSGGQARVA GLDLRSARAQ ARGRIGYVSQ KFALYANLTV EENLRFFGGA YGLRGAALRQ RMQAVLAQFD LRGHQAQPAG QLPGGVKQRL AMAVGLLHEP DILFLDEPTS GADPLARRGF WRRITALASA GTTVVVTTHF MEEAEYCDRI VIQDAGRLLA LGTPEQVRRQ AGETAQRRLD MEQAFIAIVE RARAARDTTE PTP
|
| |