| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_00030 |
|---|
| Symbol | recF |
|---|
| ID | 7758971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2688 |
|---|
| End bp | 3785 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643802930 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_002797246 |
|---|
| Protein GI | 226942173 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTCG GCCGTGTGAC CGTCACCGCG GTGCGTAACC TGCACCCGGT GACCCTGAAC
CCCTCGCCGC GCATCAACAT ACTCTACGGC CCGAACGGCA GCGGCAAGAC CAGCCTACTG
GAGGCGATCC ACCTGCTCGG CCTGGCGCGT TCCTTTCGCA GCCAGCGTCT TTCACCGGTG
ATCCAGCATG AACAGCCGGC CTGTACGGTA TTCGGGCAGG TGCTGTGGAA TGACGGTCGG
GTACGCAATC TCGGTGTGGC CCGCAACCGG CTGGGCGAAC TGCAGATTCG TATTGATGGG
CAGAACGTGC GCAGTGCCGC GCAGCTCGCC GAGTCCCTGC CGTTGCAACT GATCAATCCG
GACAGTTTTC GGCTGCTCGA GGGAGCGCCC AAGGTACGCC GCCAGTTTCT CGACTGGGGT
GTGTTCCACG TGGAACAACG TTTCCTGCCA GCCTGGCATC GCCTACAGAC GGCGCTGCGC
CAGCGGAACT CCTGGCTGCG CCATGGTAGA ATCGATCCAG TTTCGCAAGC CGCCTGGGAC
CGGGAACTGT GCCTGGCGAG CGAGGAAATC GACAGTTATC GACGCAGCTA CATTCAGGTG
CTGAAGCCGG TCTTCGAGAG CGTCCTGCAT GAGCTGGTGG AGCTGGACGG TCTGACTCTG
AGCTACTACC GCGGCTGGGA CCGGGAGCGC TCGCTCGGCG AGGTTCTTGC TGCTTCCCTT
CCGCGCGATC AGCAACTGGG GCATACCCAG GCCGGCCCGC AGCGGGCCGA TCTGCGCCTG
CGCCTGGCCG CGCACAATGC CGCGGACTTG CTGTCGCGCG GTCAGCAGAA GCTGGTGGTC
TGTGCGCTGA AGATCGCCCA GGGGCATCTC GTCGACCGCG CCAGACGCGA GTGCATCTAT
CTGGTCGACG ACCTGCCCTC CGAACTGGAT GAACAGCACC GGCGCGCGCT GTGCCGTCTG
CTCGAAGAAT TGCATTGTCA GGTGTTCATC ACCTGCGTAG ACCTTGAAGC ATTGCGTGAA
GGCTGGCGCA CGGATACGCC AGTTGCCCTG TTCCACGTGG AACAGGGCCG TATCACCCAG
ACCCACGATC GGGAGTGA
|
|---|
| Protein sequence | MSLGRVTVTA VRNLHPVTLN PSPRINILYG PNGSGKTSLL EAIHLLGLAR SFRSQRLSPV
IQHEQPACTV FGQVLWNDGR VRNLGVARNR LGELQIRIDG QNVRSAAQLA ESLPLQLINP
DSFRLLEGAP KVRRQFLDWG VFHVEQRFLP AWHRLQTALR QRNSWLRHGR IDPVSQAAWD
RELCLASEEI DSYRRSYIQV LKPVFESVLH ELVELDGLTL SYYRGWDRER SLGEVLAASL
PRDQQLGHTQ AGPQRADLRL RLAAHNAADL LSRGQQKLVV CALKIAQGHL VDRARRECIY
LVDDLPSELD EQHRRALCRL LEELHCQVFI TCVDLEALRE GWRTDTPVAL FHVEQGRITQ
THDRE
|
|---|
| |