| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9913 |
|---|
| Symbol | pemK |
|---|
| ID | 7387968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1656784 |
|---|
| End bp | 1657146 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643651245 |
|---|
| Product | plasmid stable inheritance protein K |
|---|
| Protein accession | YP_002549441 |
|---|
| Protein GI | 222148484 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2337] Growth inhibitor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.703725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGGTGC GAAGTAATAC TCCGAAGCGT GGTGAACTGT ATCTCATTGA TCTTAATCCT
GTCGTTGGAA ATGAGATGCG AGATACTCAT CGCTGCGTTG TGATCTCGCC TCGTGAGGTC
AATGTCCTCG GAATGTGTTT GACGGTTGTC GTTACGACAG GCGGTCAGTT TGCGCGAAGA
GCGGGTTTAG CCGTAAATAT TACTGGCCAC GAGACCAACG GCGTCGCTCT TTGCAATCAC
GTCAGGAGCT TCGATATCTT ATCGCGGGTC AAGCAAAAAA CGGCTCGACA CATTGACACG
CTCGACAGTG ACACAGTGGA TGAAATCGTC GCAAAAGTGG TCGGAATTAT CGAGGCCAAC
TAA
|
|---|
| Protein sequence | MTVRSNTPKR GELYLIDLNP VVGNEMRDTH RCVVISPREV NVLGMCLTVV VTTGGQFARR
AGLAVNITGH ETNGVALCNH VRSFDILSRV KQKTARHIDT LDSDTVDEIV AKVVGIIEAN
|
|---|
| |