Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9838 |
Symbol | tnp |
ID | 7379977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011986 |
Strand | + |
Start bp | 32369 |
End bp | 33274 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643648266 |
Product | transposase |
Protein accession | YP_002546503 |
Protein GI | 222102362 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCCT TCATTGACGA ACACCGCTCG GTGCTCGGGG TCGAGCCGAT CTGCAGGCTG CTGCCGATTG CCCCGTCCAC CTATTATGAG GTCGTCGCCA AGCGCACGGA CGTGGGTCGC CTATCGGCCC GCGAACGGAA TGATATTGCC ATGAAAGTCG AGATACGCCG GGTGTTCAAC GAGAACTTCC AGGTCTATGG CGTGCGGAAA GTGTGGCGAC AGTTGCAGCG AGAAGGCTTC GATATTGCTC GCTGCACCGT CGCAAGGCTC ATGAGAATGA TGGGTCTTCA AGGCATCATT CGTGGCAAGC CCATCAAAAC CACCGTATCG GACAAGTCTG CCCCGTGTCC GCTCGACCGC GTCAACCGCC ACTTCAAGGC TCCCGCGCCG AACATGCTCT GGCTTTCCGA TTTCACCTAT GTCGCGACCT GGCAGGGCTT CGTCTACGTG GCCTTTGTAA TCGATGCCTT CGCCCGCCGT ATCGTTGGCT GGCGGGCCAG TCGAACAGCG CACGCGGGAT TCGTCCTCGA TGCTCTCGAC CAGGCACTCC ATGATCGGCG GCCCGTCAAA CGTGGCGGGC TGGTTCATCA TTCCGACCGC GGCTCGCAAT ACGTGTCCAT TCGCTATTCC GAACGACTGG CCGAGGCGGG CATCGACCCG TCTGTCGGAA GCGTTGGCGA TAGTTACGAC AATGCTCTCG CCGAAACGAT CAACGGTCTT TACAAGGCCG AGGTCATCCA TCGGCGAGGA CCATGGCGCA ACTTCGAAGC TGTGGAGTTC GCCACGCTCG AATGGGTCGA CTGGTTCAAC CACCGTCGCC TTCTGGAGCC CATCGGGAAT ATCCCGCCAG CCGAGGCCGA AGAACGATAC TACGCCATAC TGGACGCGCC AGCCATGGCC GCATAA
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Protein sequence | MISFIDEHRS VLGVEPICRL LPIAPSTYYE VVAKRTDVGR LSARERNDIA MKVEIRRVFN ENFQVYGVRK VWRQLQREGF DIARCTVARL MRMMGLQGII RGKPIKTTVS DKSAPCPLDR VNRHFKAPAP NMLWLSDFTY VATWQGFVYV AFVIDAFARR IVGWRASRTA HAGFVLDALD QALHDRRPVK RGGLVHHSDR GSQYVSIRYS ERLAEAGIDP SVGSVGDSYD NALAETINGL YKAEVIHRRG PWRNFEAVEF ATLEWVDWFN HRRLLEPIGN IPPAEAEERY YAILDAPAMA A
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