Gene Avi_9818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9818 
Symbol 
ID7379960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011986 
Strand- 
Start bp17522 
End bp18220 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content53% 
IMG OID643648249 
Producthypothetical protein 
Protein accessionYP_002546486 
Protein GI222102345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CGATCGCAAC GGCGTTTTCG CTGGCTCTAG CTTCGACAGC GTACGCTCAG 
GTCCCCACAA TCGACAATGC TAACCTGAAG GTTGCTCAGG AAACATCGAA AACAACGACC 
GACATCCTCG ATACCAACAA GGAGGTTCTT AAGACCGTCG AAGAAACACT TAAGGCCGTA 
ACGGGTGACC GTGGAAGCGT GCAAAGCCCT ATGCAGAACC TTGCTATCGG CAATGGCTTC 
AGTGTCTCCC AGATGCCGTC CTTCGACAGC TTGATGAGCG GTGGCGTACC GAATTTCGGG 
AACATGGGGG GCGATATCGG CAAAATCGCC TCCACCTTTA TCAACGGGCT GCAGTTGGTG 
AAAAACCTGT CGGGAAAGGC CGATAGCACA TTCTCAGGCG ACAAGTCCTA TGAGGAGGTG 
ATGAACACGG TTCTCGGCGT TGCGGCTTTG GTGACCGGTT CAAACCAGGC GGTACAACAG 
CGTACCCAAT CCTTCCAGCA AGCAGGTCAG CAGATTGGCA AGGCTGAGGA TATCAAGGGC 
TCGATCGATC AGAATACGCA GCTTCAGGTC CAATCCGGGC TGGTGCTAAA CGAAATGATC 
GGCGTCATGA ATGGCACAGT CCAGTCGCTC AATGCTCAAA ACCAGCAACG TCTTGTCGAT 
ATGTCGAACT CGAAGAAGGC GATGACCTAC GGTGATTAA
 
Protein sequence
MKKTIATAFS LALASTAYAQ VPTIDNANLK VAQETSKTTT DILDTNKEVL KTVEETLKAV 
TGDRGSVQSP MQNLAIGNGF SVSQMPSFDS LMSGGVPNFG NMGGDIGKIA STFINGLQLV 
KNLSGKADST FSGDKSYEEV MNTVLGVAAL VTGSNQAVQQ RTQSFQQAGQ QIGKAEDIKG 
SIDQNTQLQV QSGLVLNEMI GVMNGTVQSL NAQNQQRLVD MSNSKKAMTY GD