| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9666 |
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| Symbol | |
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| ID | 7381875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 129203 |
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| End bp | 129871 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643653318 |
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| Product | autoinducer (acylhomoserine lactone) synthase |
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| Protein accession | YP_002551489 |
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| Protein GI | 222109224 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.165621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGGTTC ATGTCATTAC TTCTTCGAAT AGCGCATTAT ATCCAACTGA ACTGGATGAA
CTTTTCCGAA TTCGCCACAA GATCTACGTG GAAGAAAAGG GGTGGCGTGA AACATCGCCT
GATGGAATGG AACGCGACCA GTTCGATACC GAGCATGCCG TTCATCTCGT AGGAATCGAG
GATGGGCGAA TTATTGCAGG GTCAAGGTTT GTTCCAACCA CGCAACCGCA CCTGCTCAGC
GAGGTGTTCC CGCATCTTTG CACCCGGCCA GGCGTTCTTC GCCATGAACG CGTCGCTGAG
TGGACCCGTG GGTTCATCAT CCCGGAGTTC CGCGAGAAGG CCGGTCTTTT GATCAAGGCG
CAATTCTGCA CCGCCGTCAT GGAATATTGC TTGAACCAGG GCATCGAGCA GATAGGCGGA
ATCCAGGAGA TCTACTGGTT GCCATTGTGG AAGCGTTTCG GTTGGCGGGT CAAAGTGATC
GGGGATGCGG CCGAAATTGA TAGTGTCCTG TGTGTCCCGG CATATTTCGA GGTCTCCGTT
GAGGCCTTGG AAGGCGTGCG CAGACGGGCC AATCTTTCCA GCAGCAACCT GATCGAACAG
GGAAGGCTCG AACCGTTCGT TCCGGCACAG GCTCCCGCTT TCGATGTCTC GGTATTCTCG
GCGGTATAG
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| Protein sequence | MLVHVITSSN SALYPTELDE LFRIRHKIYV EEKGWRETSP DGMERDQFDT EHAVHLVGIE
DGRIIAGSRF VPTTQPHLLS EVFPHLCTRP GVLRHERVAE WTRGFIIPEF REKAGLLIKA
QFCTAVMEYC LNQGIEQIGG IQEIYWLPLW KRFGWRVKVI GDAAEIDSVL CVPAYFEVSV
EALEGVRRRA NLSSSNLIEQ GRLEPFVPAQ APAFDVSVFS AV
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