| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9650 |
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| Symbol | trbG |
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| ID | 7381866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 119879 |
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| End bp | 120700 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643653309 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_002551480 |
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| Protein GI | 222109215 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0266012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAT TGACGAAATT GCGTGCGAGC GTTGTGACCG CACTGGTCCT TTTGACTGCC
GCGCCCACCC TGGGCGGTGC TGCCGACTAC AACGCAAGCA AGGGCACCCG GCTTTCAGGC
CAATGGCAGG ACGCCGGCGC TGTCATGACA CGCGGACCTG ACGGACAGGT CATCTATCTG
TTTGGCGAAA CGCAGCCGAC CGTCGTCTGC GCACCCTTGC AGCTTTGTGA GGTGCAGCTG
CAGCCCGGAG AGGCCGTGCG CGATGTTCTC GTCGGTGACA CTGTTCGATG GCAGGTTGAG
CCCGCGTCGT CTGGTTCGCC GCAGGGACAG CGTATCAGCC TGATCGTCAA GCCTGCCGAA
GCCGGTTTGA AGACTTCGAT GGTCATTACG ACGTCACGCC GGACCTATCA TATCAATCTG
CAGTCCGACG GCACACGCTA TATGGCGCGC GTCGCCTTCA AATACCCCGA AGACGTTCGC
CAGCAGCTAG CGGCGGTAAA CCAGAAGATC TCGGATAGCA TCATTCCGGG TGCTGGCATT
CCAGCCGAAA ACCTCCGTTT TGATTTTTCC ATGCGCGGCT CCGCCCGCTG GAAACCAACC
CGGATCTATA CCGACGGGAC GAAGACGTAC ATTCAGTTCC CCGGCCAAAT GAGAAGTGGC
GATGCCCCAG TCCTCTATGT CGTGTCCGGA GGACAGAACC AGATCGTCAA CTACCGACTG
AACAACAACA TGATGGTGGT CGATTATCTA ATCGATCGGG CCGTTCTGAT TTCGGGCGTC
GGTCGGCAGC AGCAGAAAAT CACCATCAGC AGGAGGGGTT AA
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| Protein sequence | MFKLTKLRAS VVTALVLLTA APTLGGAADY NASKGTRLSG QWQDAGAVMT RGPDGQVIYL
FGETQPTVVC APLQLCEVQL QPGEAVRDVL VGDTVRWQVE PASSGSPQGQ RISLIVKPAE
AGLKTSMVIT TSRRTYHINL QSDGTRYMAR VAFKYPEDVR QQLAAVNQKI SDSIIPGAGI
PAENLRFDFS MRGSARWKPT RIYTDGTKTY IQFPGQMRSG DAPVLYVVSG GQNQIVNYRL
NNNMMVVDYL IDRAVLISGV GRQQQKITIS RRG
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