Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9593 |
Symbol | traC |
ID | 7381938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | - |
Start bp | 64932 |
End bp | 65156 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643653273 |
Product | conjugal transfer protein Dtr system |
Protein accession | YP_002551444 |
Protein GI | 222109179 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.219001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAGA GAACCAAATC GCCGGCTGAG ATCAAAGCGG CCATGGAAGC GCTCAAGGTT GAGCTGAAAG AGGCCGAAGC GCGCGAGGCT GAACGCCTCG GATCGCTCGC CGTCAAAGCC GGATTGCATG AGATCGACAT CGATGACGCT GTTCTGGTGT CGGCGCTGAA AGAACTGGCC GCACGATTTC AATCCTCGTC GCAACTGTCC AACACGACGG CTTAG
|
Protein sequence | MAKRTKSPAE IKAAMEALKV ELKEAEAREA ERLGSLAVKA GLHEIDIDDA VLVSALKELA ARFQSSSQLS NTTA
|
| |