| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9124 |
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| Symbol | idnO |
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| ID | 7367678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 88901 |
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| End bp | 89671 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643644325 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_002542622 |
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| Protein GI | 222083219 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.991877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGAAA GAACACTCTT CAATCTGGAC GGCAAGCATG CGCTCGTCAC CGGATCAAGC
CAGGGCATCG GCCTGGCGAT TGCCGAAGGC CTTGCGAGCT ATGGCGCAAG CGTAACCCTG
AACGGCCGCG ATCCCGCCAA GCTTGAGGCG GCCCGGAACA CGCTCAAAAA AGCAGGAGCC
GAGGTCAACG CCGCTGCGTT CGATGTCACG GACGCAAAGG CAGCGACGAA TGGCGTCCGC
CTTATTGAGG AACGTTTCGG ACCAGTCGAC ATCCTTGTCA ACAATGCCGG CATGCAGTTT
CGCTCGCCAC TTGATAAGTT TCCGCACGAC AAGTGGGACG CGCTGCTGAG GACAAATGTC
TCGAGCGTCT TCTACGTTTC GCAGCCCGTC GCGCAGCAAA TGATCGAACG GGGCGGCGGC
AAGATCATCA ACATTGCCTC GGTGCAAAGC GAACTCGCAC GCCCCGGCAT CGCGCCATAT
ACGGCAACCA AGGGCGCAGT TAAAAACCTG ACACGCGGCA TGTGCACTGA CTGGGCCCGT
CATGGGTTAC AGATCAACGC CATCGCACCC GGCTATTTTA AAACTCCACT CAATCAGGCT
CTTGTCGATG ACACGGCGTT TTCCGCGTGG CTTGAGACAC GCACACCGGC AGGCCGCTGG
GGCAACGTGT CAGAACTTAT CGGCGCTGCA GTGTTCCTTG CGAGTGATGC ATCGTCATTC
ATCAATGGGC ATACACTTTA TGTCGATGGC GGGATTACCG TATCGCTCTA G
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| Protein sequence | MLERTLFNLD GKHALVTGSS QGIGLAIAEG LASYGASVTL NGRDPAKLEA ARNTLKKAGA
EVNAAAFDVT DAKAATNGVR LIEERFGPVD ILVNNAGMQF RSPLDKFPHD KWDALLRTNV
SSVFYVSQPV AQQMIERGGG KIINIASVQS ELARPGIAPY TATKGAVKNL TRGMCTDWAR
HGLQINAIAP GYFKTPLNQA LVDDTAFSAW LETRTPAGRW GNVSELIGAA VFLASDASSF
INGHTLYVDG GITVSL
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