Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9109 |
Symbol | |
ID | 7367825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 76207 |
End bp | 77067 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643644314 |
Product | hypothetical protein |
Protein accession | YP_002542611 |
Protein GI | 222083208 |
COG category | [K] Transcription |
COG ID | [COG3636] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR02684] probable addiction module antidote protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.689253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACACCG TCTTCATCGG TGGCTCGCGA CACATTTCGC GGCTGCCTGC TCAAGCGAAA GAGCGATTAA ACAATATCAT TGAGAATGGG CATCACGTAG TTGTCGGCGA CGCCAATGGT GCGGACAAAG CAGTCCAAAA GCACTTTTCA GACGCAGCCT ATGAAAAGGT GACCGTATTC TGCTCCGGCG ACAAACCTCG CAATAATCTC GGTGAATGGC GAACGCAAAA TATCACGCCG CCTAAGCACG TGAAGGGCTT CCAGTTTTAT GCGGCGAAGG ACCGCGAGAT GACCCGAGAG GCCGATTTCG GATTCATGAT CTGGGACGGC AAGAGCCCTG GCACGGTCTT GAACGTCCTG CGCCTAATCA AGGCTGGGAA AAAAGCTGTC CTTTTGAACG TTCCTGAGAA GTCACCGGTA ACATTTAAAA CCGGAGAACA ATGGAGCGCG TTTCTAGCCA AATGTAGCGC TGACCTCCGC GAAAATTTAC GCGACCGCGC GACTTCTGAC GAATGGGAAG TAGAGGAATC AAGCGCGCAA GCCGATCTGC TGGAAACGGT TCGAGACGTT GAGCCGGTGA AGGACTCCAC CACCACAGGC CTTCCACCGG TCGGGGATCC AGCTGCCAAT GTGAATGCTG CCCTGGCCTC TGGCGACCCC TCCTCATTTA TCGACGCGTT GGGCCATCTT GCCCGTGCGA AAAAGGGAGG AATGACGCAG ATAGCGAAAG AAACAGGGTT AGCTAGAGAA AGCCTTTACA GGGCGCTCGG AAAAGATGGC AATCCGGAAC TGGTGTCAAT ACTCAAGGTC ATTTCCGCGC TGGGCCTCAC GCTCGAAGCG AAGATGCAAA CCAACCCGTA A
|
Protein sequence | MNTVFIGGSR HISRLPAQAK ERLNNIIENG HHVVVGDANG ADKAVQKHFS DAAYEKVTVF CSGDKPRNNL GEWRTQNITP PKHVKGFQFY AAKDREMTRE ADFGFMIWDG KSPGTVLNVL RLIKAGKKAV LLNVPEKSPV TFKTGEQWSA FLAKCSADLR ENLRDRATSD EWEVEESSAQ ADLLETVRDV EPVKDSTTTG LPPVGDPAAN VNAALASGDP SSFIDALGHL ARAKKGGMTQ IAKETGLARE SLYRALGKDG NPELVSILKV ISALGLTLEA KMQTNP
|
| |