Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9007 |
Symbol | exsG |
ID | 7367757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | + |
Start bp | 6113 |
End bp | 7192 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643644256 |
Product | two component sensor kinase |
Protein accession | YP_002542553 |
Protein GI | 222083150 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGACA AAAACGAAAC CGGCGATGGC GATGGAGCCG ACGGTCACTT CCAGCGACCC GAAGCGGTCG TCGGAGCGGA TAAGCCGGCG CACGACCCAG CCGCGTTCCT GGCTGCTATC ATCGAATCGT CCGAGGACGC CATCGTCAGC AAATCCCTTC AGGGGATCAT CACCACCTGG AACAAGGGCG CCGAGCGGCT TTTCGGATAC AGCGCCGCAG AAGCTGTCGA TAAGCCGGTT ACGATTCTCA TTCCGGAGGA TCGGCTTGAC GAGGAGCCGG CGATCCTGGC GCGGATTCAT GCCGGGGAGC GCGTCGACCA TTTCGAAACA ATCAGGCGTC GCAAGGATGG CACCTTACTC GACATTTCGC TGACGATCTC GCCGATCCGC AACGGCGACG GCCAGATTAT CGGAGCCTCG AAGATCGCCC GTGACATTTC GGACCGAAAA CGCGCAGCCG AACGCCAGGA TCTTCTGCTT CGGGAGATGC ATCATCGGGT CAAGAACCTG TTTGCCATCA CCGGCAGCAT CATCACGTTG GCGGCCCGCA CCGCGCAGAC GCCGGGCGAA CTCGCGTCCT CAATGAAAGA CCGTCTCGTG GCGCTCTCGC AAGCGCACGA GATGACACTT CCGAGCTTCA CAGGCGACGA AGCATTTCAG GAGCGTTCCA CGACCCTCTT CGAACTTTTG TCCAGCCTGC TTTCACCATA CGGCGAGGGT GAGGAAGGGC GGTGGCGCCT TCATGGTGAA GACGCACCGA TCAGCGCTGA GCGCGTAACG AGCCTTGCAT TGCTGTTTCA TGAATATGCG ACCAATGCCG TGAAATACGG ATCACTCTCC AGTGTACAAG GTCGATTGGA CGTGACGCTC GGCGCACGCG AGGAGAGCTT CGAGATTTCA TGGTTGGAAT CGGGCGGACG ATCTTCCGGC AAACCAGAAC CAACAAATGC GGGGTTCGGC ACGAGGCTGG AACAGATGAT CATCTGCACC CTCAATGCAG AAGTTTCCAG AGATTGGCAG CCGCACGGCC TCCTGATCAA ACTTTCAATG CCCCGCGCCG CTTTCGCCGC GCCAGTTTAG
|
Protein sequence | MTDKNETGDG DGADGHFQRP EAVVGADKPA HDPAAFLAAI IESSEDAIVS KSLQGIITTW NKGAERLFGY SAAEAVDKPV TILIPEDRLD EEPAILARIH AGERVDHFET IRRRKDGTLL DISLTISPIR NGDGQIIGAS KIARDISDRK RAAERQDLLL REMHHRVKNL FAITGSIITL AARTAQTPGE LASSMKDRLV ALSQAHEMTL PSFTGDEAFQ ERSTTLFELL SSLLSPYGEG EEGRWRLHGE DAPISAERVT SLALLFHEYA TNAVKYGSLS SVQGRLDVTL GAREESFEIS WLESGGRSSG KPEPTNAGFG TRLEQMIICT LNAEVSRDWQ PHGLLIKLSM PRAAFAAPV
|
| |